PPDB

The Plant Proteome Database

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AT2G29500.1   HSP20-like chaperones superfamily protein

Lab Annot. small heat shock protein sHSP 17.6 B - Class CI
Mapman: 20.2.1 stress.abiotic.heat
Curated Location
Species Arabidopsis thaliana     Source: TAIR Arabidopsis (v.11)
Links TAIR   PeptideAtlas   POGS   SUBA   Uniprot   PTM     Get sequence
Related Genes

AccverSpeciesEvalueMatchlen%Iden%Similar#spotsTargetP
AT1G07400.1 11Arabidopsis thaliana6E-8915784892 (2)_
AT1G59860.1 11Arabidopsis thaliana9E-7815781870 (0)_
AT1G53540.1 11Arabidopsis thaliana4E-7215868823 (3)_
Os03g15960.1 7Oryza sativa5E-6715763750 (0)_
Os01g04380.1 7Oryza sativa7E-6414671840 (0)_
Os01g04370.1 7Oryza sativa2E-6314670840 (0)_
Zm00001eb011930_P001 agpv5Zea mays1E-6715565780 (0)_
v1_GRMZM2G306679_P01 4a53Zea mays1E-6715565781 (1)_
GRMZM2G306679_P01 3.21Zea mays1E-6715565780 (0)_
Show all       

#Spots: The number of publicly accessible spots are in parenthesis

Prediction
PFAM: ArsA_HSP20(1) CS(2) DUF4488(1) FKBP26_C(2) HSP20(1)
TargetP: Chloroplast (Class 5 C0.459; M0.176; S0.047; _0.406)
Predotar:
Subcel. Location: Stroma
TM-HMM prediction: No
Aramemnon:
TAT position:
Length 153 aa (-cTP 120)
Molecular Weight 17.56 kDA(-cTP 13.63)
PI 6.33(-cTP 6.83)

Experimental Evidence

Expand

View Identified Peptides  

View GeneModel  

Expr*SpotMW nativeMW denaturedpI nativepI denaturedTypeMowseAmbiguityTissueSample fromGenotype
1395Detail       leaf [A. thaliana] total leaf tissue wild-type (rep. 1)
1407Detail       leaf [A. thaliana] total leaf tissue 1.07 rep 2. clpr2-1
1411Detail       leaf [A. thaliana] total leaf tissue 1.07 rep 1.1 clpr2-1
1415Detail       leaf [A. thaliana] total leaf tissue 1.14 rep 1.1 clpr2-1
1416Detail       leaf [A. thaliana] total leaf tissue 1.14 rep 1.2 clpr2-1

* For details about the exprimental sources click here.

Published Proteomics Data

22060019(phosphoproteome - N-starved seedlings)
21988472(vacuole (unfiltered data))

Comparative Proteomics Data


©Klaas J. van Wijk Lab, Cornell University   Web Accessibility Help