PPDB

The Plant Proteome Database

Search PPDB by:

HyperLink
HyperLink
HyperLink
HyperLink
HyperLink
HyperLink
HyperLink
HyperLink
HyperLink HyperLink HyperLink

 

PPDB home page

AT2G29380.1   highly ABA-induced PP2C protein 3

Lab Annot. highly ABA-induced PP2C gene 3
Mapman: 29.4.5 protein.postranslational modification.phosphatase
Curated Location
Species Arabidopsis thaliana     Source: TAIR Arabidopsis (v.11)
Links TAIR   PeptideAtlas   POGS   SUBA   Uniprot   PTM     Get sequence
Related Genes

AccverSpeciesEvalueMatchlen%Iden%Similar#spotsTargetP
AT1G07430.1 11Arabidopsis thaliana2E-15332070800 (0)_
AT5G59220.1 11Arabidopsis thaliana1E-12328266750 (0)C
AT3G11410.1 11Arabidopsis thaliana3E-11836253670 (0)_
Os09g15670.1 7Oryza sativa1E-11831258710 (0)C
Os01g62760.1 7Oryza sativa2E-11535453660 (0)C
Os03g16170.1 7Oryza sativa7E-11234153650 (0)C
Zm00001eb012040_P002 agpv5Zea mays6E-11235551630 (0)C
GRMZM2G059453_P01 3.21Zea mays2E-11031659690 (0)C
Zm00001eb148130_P001 agpv5Zea mays2E-11031659690 (0)C
Show all       

#Spots: The number of publicly accessible spots are in parenthesis

Prediction
PFAM: FAM72(1) HD-ZIP_N(1) PP2C(1) PP2C_2(1) SpoIIE(2)
TargetP: Cytoplasm (Class 4 C0.406; M0.073; S0.029; _0.712)
Predotar:
Subcel. Location:
TM-HMM prediction: No
Aramemnon:
TAT position:
Length 362 aa (-cTP 332)
Molecular Weight 40.30 kDA(-cTP )
PI 5.34(-cTP )

Experimental Evidence

Expand

View Identified Peptides  

View GeneModel  

Expr*SpotMW nativeMW denaturedpI nativepI denaturedTypeMowseAmbiguityTissueSample fromGenotype
1470Detail       leaf [A. thaliana] co-IP GST stroma clpc1 x clps (rep. 3)
2172Detail       leaf [A. thaliana] stroma Clp gst against clpF/clpS1 stroma
2266Detail       leaf [A. thaliana] stroma Clp Clp C1 wild-type
2267Detail       leaf [A. thaliana] stroma Clp Clp C1 TRAP

* For details about the exprimental sources click here.

Published Proteomics Data

Comparative Proteomics Data


©Klaas J. van Wijk Lab, Cornell University   Web Accessibility Help