PPDB

The Plant Proteome Database

Search PPDB by:

HyperLink
HyperLink
HyperLink
HyperLink
HyperLink
HyperLink
HyperLink
HyperLink
HyperLink HyperLink HyperLink

 

PPDB home page

AT2G29370.1   NAD(P)-binding Rossmann-fold superfamily protein

Lab Annot. NAD(P)-binding Rossmann-fold protein
Mapman: 26.8 misc.nitrilases, *nitrile lyases, berberine bridge enzymes, reticuline oxidases, troponine reductases
Curated Location
Species Arabidopsis thaliana     Source: TAIR Arabidopsis (v.11)
Links TAIR   PeptideAtlas   POGS   SUBA   Uniprot   PTM     Get sequence
Related Genes

AccverSpeciesEvalueMatchlen%Iden%Similar#spotsTargetP
AT2G29360.1 11Arabidopsis thaliana8E-155267778885 (71)_
AT2G29150.1 11Arabidopsis thaliana2E-15426777880 (0)_
AT2G29350.1 11Arabidopsis thaliana3E-151267778640 (31)_
Os03g16220.1 7Oryza sativa8E-12225365800 (0)M
Os03g16210.1 7Oryza sativa2E-11625362790 (0)C
Os03g16230.2 7Oryza sativa1E-10925362770 (0)M
GRMZM2G141799_P01 3.21Zea mays5E-119264607853 (53)_
Zm00001eb012060_P001 agpv5Zea mays5E-11926460780 (0)_
Zm00001eb165810_P001 agpv5Zea mays1E-9326253670 (0)_
Show all       

#Spots: The number of publicly accessible spots are in parenthesis

Prediction
PFAM: adh_short(1) adh_short_C2(1) DUF1776(1) DUF3142(2) Epimerase(2) Homoserine_dh(1)
TargetP: Cytoplasm (Class 3 C0.086; M0.309; S0.020; _0.794)
Predotar:
Subcel. Location:
TM-HMM prediction: No
Aramemnon:
TAT position:
Length 268 aa (-cTP 259)
Molecular Weight 28.72 kDA(-cTP )
PI 6.34(-cTP )

Experimental Evidence

Expand

View Identified Peptides  

View GeneModel  

Expr*SpotMW nativeMW denaturedpI nativepI denaturedTypeMowseAmbiguityTissueSample fromGenotype
528Detail       leaf [A. thaliana] total leaf tissue wild-type (wt2)
1424Detail       leaf [A. thaliana] total leaf tissue prep1xprep2xt1xt2 (rep. 1)
1533Detail       leaf [A. thaliana] total leaf tissue - 30 uM CAP clps (rep. 1)
2182Detail       Rosettes [A. thaliana] total soluble tic40 and wt
2183Detail       Rosettes [A. thaliana] total soluble tic40 and wt

* For details about the exprimental sources click here.

Published Proteomics Data

Comparative Proteomics Data


©Klaas J. van Wijk Lab, Cornell University   Web Accessibility Help