PPDB

 The Plant Proteome Database

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AT2G29350.2   senescence-associated gene 13
Lab Annot. SAG13 (Senescence-associated gene 13); oxidoreductase
Mapman: 26.8 misc.nitrilases, *nitrile lyases, berberine bridge enzymes, reticuline oxidases, troponine reductases
Curated Location
Species Arabidopsis thaliana     Source: TAIR Arabidopsis (v.11)
Links TAIR   PeptideAtlas   POGS   SUBA   Uniprot   Uniprot   Uniprot   PTM     Get sequence
Related Genes

AccverSpeciesEvalueMatchlen%Iden%Similar#spotsTargetP
AT2G29350.1 11Arabidopsis thaliana5E-15320710010043 (31)_
AT2G29290.2 11Arabidopsis thaliana4E-126199849386 (58)_
AT2G29350.3 11Arabidopsis thaliana2E-1241691001003 (3)_
Os03g16220.3 7Oryza sativa8E-10120767820 (0)M
Os03g16220.2 7Oryza sativa1E-10020767820 (0)M
Os03g16220.1 7Oryza sativa6E-10019968830 (0)M
GRMZM2G141799_P01 3.21Zea mays7E-98202658153 (53)_
Zm00001eb012060_P001 agpv5Zea mays7E-9820265810 (0)_
Zm00001eb165810_P001 agpv5Zea mays2E-7020354670 (0)_
Show all       

#Spots: The number of publicly accessible spots are in parenthesis
Prediction
PFAM: Adenylsucc_synt(1) adh_short(1) adh_short_C2(1) Epimerase(1) KR(1)
TargetP: Cytoplasm (Class 2 C0.092; M0.195; S0.041; _0.824)
Predotar:
Subcel. Location:
TM-HMM prediction: No
Aramemnon:
TAT position:
Length 225 aa (-cTP 188)
Molecular Weight 24.39 kDA(-cTP )
PI 8.90(-cTP )

Experimental Evidence

Expand

View Identified Peptides  

View GeneModel  
Expr*SpotMW nativeMW denaturedpI nativepI denaturedTypeMowseAmbiguityTissueSample fromGenotype
1345Detail       leaf [A. thaliana] total tissue (5 day HL) wild-type (rep. 1)
1346Detail       leaf [A. thaliana] total tissue (5 day HL) wild-type (rep. 2)
1347Detail       leaf [A. thaliana] total tissue (5 day HL) wild-type (rep. 3)
1349Detail       leaf [A. thaliana] total tissue (5 day HL) abck2xabck3 (rep. 2)
1417Detail       leaf [A. thaliana] total tissue (2% sucrose) clpr4-1 (rep. 2)
1439Detail       leaf [A. thaliana] total tissue (0 day HL) wild-type (rep. 1)
1440Detail       leaf [A. thaliana] total tissue (0 day HL) wild-type (rep. 2)
1441Detail       leaf [A. thaliana] total tissue (0 day HL) wild-type (rep. 3)
1443Detail       leaf [A. thaliana] total tissue (0 day HL) abck2xabck3 (rep. 2)
1445Detail       leaf [A. thaliana] total tissue (3 day HL) wild-type (rep. 1)
1446Detail       leaf [A. thaliana] total tissue (3 day HL) wild-type (rep. 2)
1448Detail       leaf [A. thaliana] total tissue (3 day HL) abck2xabck3 (rep. 1)
1449Detail       leaf [A. thaliana] total tissue (3 day HL) abck2xabck3 (rep. 2)
1540Detail       leaf [A. thaliana] Thylakoids plastoglobulewild-type
2003Detail       leaf [A. thaliana] over expressed M48 plastoglobuleM48
2004Detail       leaf [A. thaliana] WT PG plastoglobuleWT
2005Detail       leaf [A. thaliana] RNAi PG plastoglobuleRNAi
2006Detail       leaf [A. thaliana] over expressed M48 plastoglobuleM48
2008Detail       leaf [A. thaliana] RNAi PG plastoglobuleRNAi
2030Detail       leaf [A. thaliana] over expressed M48 plastoglobuleM48
2182Detail       Rosettes [A. thaliana] total soluble tic40 and wt
2183Detail       Rosettes [A. thaliana] total soluble tic40 and wt

* For details about the exprimental sources click here.

Published Proteomics Data

 18436743(specific to flower)
19525416(leaf (wt and clpr4-1 mutant))

Comparative Proteomics Data

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