PPDB

PPDB	The Plant Proteome Database

Search PPDB by:

PPDB home page

AT2G29350.1 senescence-associated gene 13

Lab Annot.

SAG13 (Senescence-associated gene 13); oxidoreductase
Mapman: 26.8 misc.nitrilases, *nitrile lyases, berberine bridge enzymes, reticuline oxidases, troponine reductases

Curated Location

Species

Arabidopsis thaliana Source: TAIR Arabidopsis (v.11)

Links

TAIR PeptideAtlas POGS SUBA Uniprot Uniprot Uniprot PTM Get sequence

Related Genes

Acc ver Species Evalue Matchlen %Iden %Similar #spots TargetP
AT2G29350.3 11 Arabidopsis thaliana 6E-175 231 100 100 3 (3) _
AT2G29290.2 11 Arabidopsis thaliana 1E-162 258 83 91 74 (58) _
AT2G29360.1 11 Arabidopsis thaliana 2E-159 271 80 87 85 (71) _
Os03g16220.1 7 Oryza sativa 1E-124 258 65 80 0 (0) M
Os03g16210.1 7 Oryza sativa 3E-120 253 66 79 0 (0) C
Os03g16230.2 7 Oryza sativa 3E-118 264 65 78 0 (0) M
GRMZM2G141799_P01 3.21 Zea mays 4E-124 258 64 80 53 (53) _
Zm00001eb012060_P001 agpv5 Zea mays 4E-124 258 64 80 0 (0) _
Zm00001eb165790_P001 agpv5 Zea mays 1E-92 259 55 70 0 (0) M
Show all

#Spots: The number of publicly accessible spots are in parenthesis

Prediction

PFAM:	adh_short(1) adh_short_C2(1) Epimerase(1) KR(1)
TargetP:	Cytoplasm (Class 2 C0.092; M0.195; S0.041; _0.824)
Predotar:
Subcel. Location:
TM-HMM prediction:	No
Aramemnon:
TAT position:
Length	269 aa (-cTP 232)
Molecular Weight	28.82 kDA(-cTP )
PI	5.64(-cTP )

Experimental Evidence

Expand

View Identified Peptides

View GeneModel

Expr*	Spot	MW native	MW denatured	pI native	pI denatured	Type	Mowse	Ambiguity	Tissue	Sample from	Genotype
1345	Detail								leaf [A. thaliana]	total tissue (5 day HL)	wild-type (rep. 1)
1346	Detail								leaf [A. thaliana]	total tissue (5 day HL)	wild-type (rep. 2)
1347	Detail								leaf [A. thaliana]	total tissue (5 day HL)	wild-type (rep. 3)
1349	Detail								leaf [A. thaliana]	total tissue (5 day HL)	abck2xabck3 (rep. 2)
1417	Detail								leaf [A. thaliana]	total tissue (2% sucrose)	clpr4-1 (rep. 2)
1439	Detail								leaf [A. thaliana]	total tissue (0 day HL)	wild-type (rep. 1)
1440	Detail								leaf [A. thaliana]	total tissue (0 day HL)	wild-type (rep. 2)
1441	Detail								leaf [A. thaliana]	total tissue (0 day HL)	wild-type (rep. 3)
1443	Detail								leaf [A. thaliana]	total tissue (0 day HL)	abck2xabck3 (rep. 2)
1445	Detail								leaf [A. thaliana]	total tissue (3 day HL)	wild-type (rep. 1)
1446	Detail								leaf [A. thaliana]	total tissue (3 day HL)	wild-type (rep. 2)
1448	Detail								leaf [A. thaliana]	total tissue (3 day HL)	abck2xabck3 (rep. 1)
1449	Detail								leaf [A. thaliana]	total tissue (3 day HL)	abck2xabck3 (rep. 2)
1540	Detail								leaf [A. thaliana]	Thylakoids plastoglobule	wild-type
2003	Detail								leaf [A. thaliana]	over expressed M48 plastoglobule	M48
2004	Detail								leaf [A. thaliana]	WT PG plastoglobule	WT
2005	Detail								leaf [A. thaliana]	RNAi PG plastoglobule	RNAi
2006	Detail								leaf [A. thaliana]	over expressed M48 plastoglobule	M48
2008	Detail								leaf [A. thaliana]	RNAi PG plastoglobule	RNAi
2030	Detail								leaf [A. thaliana]	over expressed M48 plastoglobule	M48
2182	Detail								Rosettes [A. thaliana]	total soluble	tic40 and wt
2183	Detail								Rosettes [A. thaliana]	total soluble	tic40 and wt

* For details about the exprimental sources click here.

Published Proteomics Data

18436743(specific to flower)
19525416(leaf (wt and clpr4-1 mutant))

Comparative Proteomics Data