PPDB

The Plant Proteome Database

Search PPDB by:

HyperLink
HyperLink
HyperLink
HyperLink
HyperLink
HyperLink
HyperLink
HyperLink
HyperLink HyperLink HyperLink

 

PPDB home page

AT2G29330.1   tropinone reductase

Lab Annot.
Mapman: 26.8 misc.nitrilases, *nitrile lyases, berberine bridge enzymes, reticuline oxidases, troponine reductases
Curated Location
Species Arabidopsis thaliana     Source: TAIR Arabidopsis (v.11)
Links TAIR   PeptideAtlas   POGS   SUBA   Uniprot   PTM     Get sequence
Related Genes

AccverSpeciesEvalueMatchlen%Iden%Similar#spotsTargetP
AT2G30670.1 11Arabidopsis thaliana3E-15726080880 (0)_
AT2G29340.2 11Arabidopsis thaliana2E-1552607988106 (76)_
AT2G29340.1 11Arabidopsis thaliana3E-1552607988106 (76)_
Os03g16220.1 7Oryza sativa1E-11225460760 (0)M
Os03g16210.1 7Oryza sativa6E-11025360740 (0)C
Os03g16230.2 7Oryza sativa3E-10525358760 (0)M
GRMZM2G141799_P01 3.21Zea mays6E-113257617553 (53)_
Zm00001eb012060_P001 agpv5Zea mays6E-11325761750 (0)_
Zm00001eb165790_P001 agpv5Zea mays4E-8725453680 (0)M
Show all       

#Spots: The number of publicly accessible spots are in parenthesis

Prediction
PFAM: 3Beta_HSD(1) adh_short(1) adh_short_C2(1) Epimerase(2) KR(1) Methyltransf_25(1)
TargetP: Cytoplasm (Class 4 C0.018; M0.173; S0.316; _0.538)
Predotar:
Subcel. Location:
TM-HMM prediction: No
Aramemnon: 2 TMs
TAT position:
Length 260 aa (-cTP 194)
Molecular Weight 27.66 kDA(-cTP )
PI 5.61(-cTP )

Experimental Evidence

 

View GeneModel  

* For details about the exprimental sources click here.

Published Proteomics Data

18436743(specific to roots)

Comparative Proteomics Data


©Klaas J. van Wijk Lab, Cornell University   Web Accessibility Help