PPDB

The Plant Proteome Database

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AT2G29290.1   NAD(P)-binding Rossmann-fold superfamily protein

Lab Annot. tropinone reductase, putative / tropine dehydrogenase, putative
Mapman: 16.4.1 secondary metabolism.N misc.alkaloid-like
Curated Location
Species Arabidopsis thaliana     Source: TAIR Arabidopsis (v.11)
Links TAIR   PeptideAtlas   POGS   SUBA   Uniprot   PTM     Get sequence
Related Genes

AccverSpeciesEvalueMatchlen%Iden%Similar#spotsTargetP
AT2G29290.2 11Arabidopsis thaliana9E-18024010010074 (58)_
AT2G29350.1 11Arabidopsis thaliana4E-150237849140 (31)_
AT2G29350.3 11Arabidopsis thaliana5E-14622984913 (3)_
Os03g16220.1 7Oryza sativa9E-11123463800 (0)M
Os03g16210.1 7Oryza sativa4E-10823462790 (0)C
Os03g16230.2 7Oryza sativa3E-10323363800 (0)M
GRMZM2G141799_P01 3.21Zea mays8E-110237617953 (53)_
Zm00001eb012060_P001 agpv5Zea mays8E-11023761790 (0)_
Zm00001eb165810_P001 agpv5Zea mays3E-8023850690 (0)_
Show all       

#Spots: The number of publicly accessible spots are in parenthesis

Prediction
PFAM: adh_short(1) adh_short_C2(1) KR(1)
TargetP: Cytoplasm (Class 3 C0.159; M0.133; S0.028; _0.629)
Predotar:
Subcel. Location:
TM-HMM prediction: No
Aramemnon: 2 TMs
TAT position:
Length 245 aa (-cTP 240)
Molecular Weight 26.69 kDA(-cTP )
PI 5.10(-cTP )

Experimental Evidence

Expand

View Identified Peptides  

View GeneModel  

Expr*SpotMW nativeMW denaturedpI nativepI denaturedTypeMowseAmbiguityTissueSample fromGenotype
310Detail       leaf [A. thaliana] total leaf tissue clpr2-1:R2-TAPlong
352Detail       leaf [A. thaliana] total leaf tissue 1.07 wild-type
361Detail       leaf [A. thaliana] total leaf tissue 1.07 wild-type
371Detail       leaf [A. thaliana] total leaf tissue clpr4-1
527Detail       leaf [A. thaliana] total leaf tissue wild-type (wt1)
622Detail       leaf [A. thaliana] total leaf tissue wild-type
1533Detail       leaf [A. thaliana] total leaf tissue - 30 uM CAP clps (rep. 1)
2182Detail       Rosettes [A. thaliana] total soluble tic40 and wt
2183Detail       Rosettes [A. thaliana] total soluble tic40 and wt

* For details about the exprimental sources click here.

Published Proteomics Data

19525416(leaf (wt and clpr4-1 mutant))

Comparative Proteomics Data


©Klaas J. van Wijk Lab, Cornell University   Web Accessibility Help