PPDB

The Plant Proteome Database

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AT2G29210.1   splicing factor PWI domain-containing protein

Lab Annot. splicing factor PWI domain-containing protein
Mapman: 27.1.1 RNA.processing.splicing
Curated Location
Species Arabidopsis thaliana     Source: TAIR Arabidopsis (v.11)
Links TAIR   PeptideAtlas   POGS   SUBA   Uniprot   PTM     Get sequence
Related Genes

AccverSpeciesEvalueMatchlen%Iden%Similar#spotsTargetP
AT2G29210.2 11Arabidopsis thaliana087897970 (0)_
AT3G12440.1 11Arabidopsis thaliana8E-0716745520 (0)_
Os03g16369.1 7Oryza sativa2E-7516873830 (0)_
Os03g16369.2 7Oryza sativa2E-7516873830 (0)_
Zm00001eb012100_P003 agpv5Zea mays1E-9747152610 (0)_
Zm00001eb012100_P005 agpv5Zea mays7E-7549749580 (0)_
Zm00001eb012100_P006 agpv5Zea mays7E-7549749580 (0)_
Show all       

#Spots: The number of publicly accessible spots are in parenthesis

Prediction
PFAM: PWI(2)
TargetP: Cytoplasm (Class 3 C0.178; M0.268; S0.041; _0.674)
Predotar:
Subcel. Location:
TM-HMM prediction: No
Aramemnon:
TAT position:
Length 878 aa (-cTP 862)
Molecular Weight 100.48 kDA(-cTP )
PI 11.72(-cTP )

Experimental Evidence

Expand

View Identified Peptides  

View GeneModel  

Expr*SpotMW nativeMW denaturedpI nativepI denaturedTypeMowseAmbiguityTissueSample fromGenotype
1545Detail       leaf [A. thaliana] TiO2 thylakoid membranewt
2254Detail       leaf [A. thaliana] total seedlings gfs9
2255Detail       leaf [A. thaliana] total seedlings gfs9
2256Detail       leaf [A. thaliana] total seedlings gfs9
2258Detail       leaf [A. thaliana] total seedlings gfs9

* For details about the exprimental sources click here.

Published Proteomics Data

16807317(Phosphoproteins)
18463617(suspension cells-phosphorylated proteins)
19245862(nuclear phosphoproteins (seedlings & cell culture))
19376835(leaf phosphoproteins)
22060019(phosphoproteome - N-starved seedlings)
21166475(cytosolic-fractions-crude)
20733066(phosphoproteome-ABA-leaf)
21768351(Leaf-Phosphoproteome)

Comparative Proteomics Data


©Klaas J. van Wijk Lab, Cornell University   Web Accessibility Help