PPDB

The Plant Proteome Database

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AT2G29180.1   transmembrane protein

Lab Annot. unknown protein
Mapman: 35.2 not assigned.unknown
Curated Location
TAIR curated location: thylakoid membrane (sensu Viridiplantae)15322131
Species Arabidopsis thaliana     Source: TAIR Arabidopsis (v.11)
Links TAIR   PeptideAtlas   POGS   SUBA   Uniprot   PTM     Get sequence
Related Genes

AccverSpeciesEvalueMatchlen%Iden%Similar#spotsTargetP
Os03g16470.2 7Oryza sativa8E-066350690 (0)C
Os03g16470.3 7Oryza sativa8E-066350690 (0)C
Os03g16470.1 7Oryza sativa8E-066350690 (0)C

#Spots: The number of publicly accessible spots are in parenthesis

Prediction
PFAM: DUF3742(1)
TargetP: Chloroplast (Class 1 C0.959; M0.118; S0.002; _0.036)
Predotar:
Subcel. Location: Transmembrane
TM-HMM prediction: 1 TMs
Aramemnon: 1 TMs
TAT position:
Length 169 aa (-cTP 104)
Molecular Weight 18.60 kDA(-cTP 11.10)
PI 9.82(-cTP 6.55)

Experimental Evidence

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View Identified Peptides  

View GeneModel  

Expr*SpotMW nativeMW denaturedpI nativepI denaturedTypeMowseAmbiguityTissueSample fromGenotype
107Detail       leaf [A. thaliana] chloroplast thylakoid membranewild-type
1413Detail       leaf [A. thaliana] total leaf tissue -114 rep1tR1 wild-type
1414Detail       leaf [A. thaliana] total leaf tissue -114 rep1tR2 wild-type
1929Detail       Rosettes [A. thaliana] Thylakoids wild-type
2012Detail       leaf [A. thaliana] total leaf tissue prep1-1xprep2-1xopda1-2

* For details about the exprimental sources click here.

Published Proteomics Data

15322131(Thylakoid-stripped)
19995723(chloroplast reference proteome)

Comparative Proteomics Data


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