PPDB

PPDB	The Plant Proteome Database

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AT2G29080.1 FTSH protease 3

Lab Annot.

FTSH3 (mAAA)
Mapman: 29.5.7.2.4* protein.degradation.metalloprotease.MA(M).M41

Curated Location

mitochondria (Pubmed: 14630971 )

TAIR curated location: thylakoid membrane (sensu Viridiplantae) & mitochondrion14630971,15322131,14671022

Species

Arabidopsis thaliana Source: TAIR Arabidopsis (v.11)

Links

TAIR PeptideAtlas POGS SUBA Uniprot PTM Get sequence

Related Genes

Acc ver Species Evalue Matchlen %Iden %Similar #spots TargetP
AT1G07510.1 11 Arabidopsis thaliana 0 817 83 89 0 (0) M
AT1G50250.1 11 Arabidopsis thaliana 3E-141 451 48 67 533 (509) C
AT5G42270.1 11 Arabidopsis thaliana 1E-139 451 48 67 956 (900) C
Os05g38400.1 7 Oryza sativa 0 770 74 84 2 (2) M
Os05g38400.2 7 Oryza sativa 0 661 80 89 2 (2) C
Os05g38400.3 7 Oryza sativa 0 661 80 89 2 (2) C
GRMZM2G038401_P01 3.21 Zea mays 0 774 73 82 11 (11) M
Zm00001eb351270_P002 agpv5 Zea mays 0 774 73 82 0 (0) M
v1_GRMZM2G038401_P01 4a53 Zea mays 0 774 73 82 10 (10) M
Show all

#Spots: The number of publicly accessible spots are in parenthesis

Prediction

PFAM:	AAA(1) AAA_16(2) AAA_17(1) AAA_2(1) AAA_22(2) AAA_33(1) AAA_5(1) AAA_lid_3(1) Ft
TargetP:	Mitochondria (Class 2 C0.123; M0.789; S0.014; _0.075)
Predotar:
Subcel. Location:
TM-HMM prediction:	No
Aramemnon:	1 TMs
TAT position:
Length	809 aa (-cTP 771)
Molecular Weight	89.35 kDA(-cTP )
PI	6.80(-cTP )

Experimental Evidence

Expand

View Identified Peptides

View GeneModel

Expr*	Spot	MW native	MW denatured	pI native	pI denatured	Type	Mowse	Ambiguity	Tissue	Sample from	Genotype
1392	Detail								leaf [A. thaliana]	total leaf tissue	wild-type (rep. 1)
1394	Detail								leaf [A. thaliana]	total leaf tissue	wild-type (rep. 1)
1395	Detail								leaf [A. thaliana]	total leaf tissue	wild-type (rep. 1)
1396	Detail								leaf [A. thaliana]	total leaf tissue	clpt1xclpt2 (rep. 2)
1397	Detail								leaf [A. thaliana]	total leaf tissue	wild-type (rep. 3)
1400	Detail								leaf [A. thaliana]	total leaf tissue 1.14 -rep. 1	wild-type
1403	Detail								leaf [A. thaliana]	total leaf tissue 1.14 -rep. 1	clpp3-1
1417	Detail								leaf [A. thaliana]	total tissue (2% sucrose)	clpr4-1 (rep. 2)
1418	Detail								leaf [A. thaliana]	total tissue (2% sucrose)	clpr4-1 (rep. 3)
1422	Detail								leaf [A. thaliana]	total leaf tissue	wild-type (rep. 2)
1424	Detail								leaf [A. thaliana]	total leaf tissue	prep1xprep2xt1xt2 (rep. 1)
1425	Detail								leaf [A. thaliana]	total leaf tissue	prep1xprep2xt1xt2 (rep. 2)
1426	Detail								leaf [A. thaliana]	total leaf tissue	prep1xprep2xt1xt2 (rep. 3)
1444	Detail								leaf [A. thaliana]	total tissue (0 day HL)	abck2xabck3 (rep. 3)
1533	Detail								leaf [A. thaliana]	total leaf tissue - 30 uM CAP	clps (rep. 1)
1744	Detail								[A. thaliana]		Mep-6
1766	Detail								leaf [A. thaliana]	Thylakoids thylakoid membrane	Met1-1
1828	Detail								leaf [A. thaliana]	Thylakoids thylakoid membrane	Col-0 Fluctuating light
2009	Detail								leaf [A. thaliana]	total leaf tissue	wild-type
2013	Detail								leaf [A. thaliana]	total leaf tissue	wt
2014	Detail								leaf [A. thaliana]	total leaf tissue	prep1-1xprep2-1
2015	Detail								leaf [A. thaliana]	total leaf tissue	opda1-2
2016	Detail								leaf [A. thaliana]	total leaf tissue	prep1-1xprep2-1xopda1-2
2017	Detail								leaf [A. thaliana]	total leaf tissue	wild-type
2018	Detail								leaf [A. thaliana]	total leaf tissue	prep1-1xprep2-1
2020	Detail								leaf [A. thaliana]	total leaf tissue	prep1-1xprep2-1xopda1-2
2320	Detail								[A. thaliana]	Thylakoids plastoglobule
2321	Detail								leaf [A. thaliana]

* For details about the exprimental sources click here.

Published Proteomics Data

MitoDB(Mitochondrial proteome)
15322131(Thylakoid-stripped)
16618929(MITO/PLASTID-LOPIT-callus)
19546170(mature pollen grains)
19525416(leaf (wt and clpr4-1 mutant))
19995723(chloroplast reference proteome)
21311031(mitochondria)
21173025(root proteome)
21472856(mitochondrial-reference-proteome-Millar-Nov2011)
21433285(Crude microsomes cell_cultures)
21433285(purified Plasma membrane -cell_cultures)

Comparative Proteomics Data