PPDB

 The Plant Proteome Database

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AT2G29050.1   RHOMBOID-like 1
Lab Annot. rhomboid protease 1 (AtRBL1)
Mapman: 29.5.5.10* protein.degradation.serine protease ST.S54
Curated Location golgi (Pubmed: 16223493 )

TAIR curated location: Golgi apparatus16223493
Species Arabidopsis thaliana     Source: TAIR Arabidopsis (v.11)
Links TAIR   PeptideAtlas   POGS   SUBA   PTM     Get sequence
Related Genes

AccverSpeciesEvalueMatchlen%Iden%Similar#spotsTargetP
AT2G29050.2 11Arabidopsis thaliana033891910 (0)_
AT3G53780.2 11Arabidopsis thaliana1E-15436758740 (0)_
AT1G63120.1 11Arabidopsis thaliana3E-13129266800 (0)_
Os11g47840.1 7Oryza sativa5E-15734261760 (0)_
Os09g35730.1 7Oryza sativa3E-135299617949 (49)_
Os03g02530.1 7Oryza sativa2E-13233056740 (0)_
Zm00001eb124440_P002 agpv5Zea mays7E-15435461740 (0)_
Zm00001eb124440_P001 agpv5Zea mays7E-15435461740 (0)_
Zm00001eb124440_P003 agpv5Zea mays7E-15435461740 (0)_
Show all       

#Spots: The number of publicly accessible spots are in parenthesis
Prediction
PFAM: DER1(2) DUF1751(3) Phage_holin_3_3(2) Rhomboid(1)
TargetP: Cytoplasm (Class 3 C0.156; M0.158; S0.005; _0.731)
Predotar:
Subcel. Location:
TM-HMM prediction: 7 TMs
Aramemnon: 7 TMs
TAT position:
Length 389 aa (-cTP 329)
Molecular Weight 43.36 kDA(-cTP )
PI 9.64(-cTP )

Experimental Evidence

 

View GeneModel  

* For details about the exprimental sources click here.

Published Proteomics Data

 21311031(chloroplasts)

Comparative Proteomics Data

©Klaas J. van Wijk Lab, Cornell University   Web Accessibility Help