PPDB

The Plant Proteome Database

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AT2G28950.1   expansin A6

Lab Annot. ATEXPA6 ( EXPANSIN A6)
Mapman: 10.7 cell wall.modification
Curated Location
TAIR curated location: cell wall (sensu Magnoliophyta)16287169
Species Arabidopsis thaliana     Source: TAIR Arabidopsis (v.11)
Links TAIR   PeptideAtlas   POGS   SUBA   Uniprot   PTM     Get sequence
Related Genes

AccverSpeciesEvalueMatchlen%Iden%Similar#spotsTargetP
AT2G39700.1 11Arabidopsis thaliana4E-16125780911 (1)S
AT2G37640.1 11Arabidopsis thaliana3E-15425580891 (1)S
AT3G55500.1 11Arabidopsis thaliana7E-15425578900 (0)S
Os03g60720.1 7Oryza sativa6E-15124582894 (4)S
Os05g39990.1 7Oryza sativa5E-11924866780 (0)M
Os01g60770.1 7Oryza sativa2E-11725564750 (0)S
v1_GRMZM2G445169_P01 4a53Zea mays2E-14725476860 (0)S
Zm00001eb211650_P001 agpv5Zea mays2E-14725476860 (0)S
GRMZM2G445169_P01 3.21Zea mays2E-14725476860 (0)S
Show all       

#Spots: The number of publicly accessible spots are in parenthesis

Prediction
PFAM: DPBB_1(1) DUF5417(2) Expansin_C(1)
TargetP: Secreted (Class 2 C0.013; M0.068; S0.807; _0.169)
Predotar:
Subcel. Location:
TM-HMM prediction: No
Aramemnon:
TAT position:
Length 257 aa (-cTP 170)
Molecular Weight 27.82 kDA(-cTP )
PI 9.76(-cTP )

Experimental Evidence

Expand

View Identified Peptides  

View GeneModel  

Expr*SpotMW nativeMW denaturedpI nativepI denaturedTypeMowseAmbiguityTissueSample fromGenotype
324Detail       leaf [A. thaliana] cell wall enriched wild-type
528Detail       leaf [A. thaliana] total leaf tissue wild-type (wt2)
1421Detail       leaf [A. thaliana] total leaf tissue wild-type (rep. 1)
1422Detail       leaf [A. thaliana] total leaf tissue wild-type (rep. 2)

* For details about the exprimental sources click here.

Published Proteomics Data

19334764(plasma membrane (cell culture))
WallDB-E.Jamet(cell wall reference proteome)

Comparative Proteomics Data


©Klaas J. van Wijk Lab, Cornell University   Web Accessibility Help