PPDB

PPDB	The Plant Proteome Database

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AT2G28920.1 RING/U-box superfamily protein

Lab Annot.

RING/U-box protein
Mapman: 29.5.11.4.2 protein.degradation.ubiquitin.E3.RING

Curated Location

Species

Arabidopsis thaliana Source: TAIR Arabidopsis (v.11)

Links

TAIR PeptideAtlas POGS SUBA Uniprot PTM Get sequence

Related Genes

Acc ver Species Evalue Matchlen %Iden %Similar #spots TargetP
AT5G41400.1 11 Arabidopsis thaliana 7E-13 80 41 60 0 (0) S
AT4G35840.1 11 Arabidopsis thaliana 4E-12 66 42 63 0 (0) _
AT2G47560.1 11 Arabidopsis thaliana 5E-12 134 28 46 0 (0) _
Os07g29600.2 7 Oryza sativa 4E-12 64 40 56 0 (0) _
Os01g55110.1 7 Oryza sativa 5E-12 82 39 50 0 (0) _
Os08g34550.1 7 Oryza sativa 1E-11 55 47 63 0 (0) _
Zm00001eb242580_P001 agpv5 Zea mays 6E-13 76 42 53 0 (0) S
Zm00001eb238220_P001 agpv5 Zea mays 6E-13 58 46 62 0 (0) _
AC214771.3_FGP002 3.21 Zea mays 6E-13 58 46 62 0 (0) _
Show all

#Spots: The number of publicly accessible spots are in parenthesis

Prediction

PFAM:	Prok-RING_1(2) Prok-RING_4(1) zf-ANAPC11(1) zf-C3HC4(1) zf-C3HC4_2(1) zf-C3HC4_3
TargetP:	Cytoplasm (Class 4 C0.186; M0.028; S0.456; _0.736)
Predotar:
Subcel. Location:
TM-HMM prediction:	1 TMs
Aramemnon:	1 TMs
TAT position:
Length	145 aa (-cTP 139)
Molecular Weight	15.87 kDA(-cTP )
PI	4.68(-cTP )

Experimental Evidence

View GeneModel

* For details about the exprimental sources click here.

Published Proteomics Data

Comparative Proteomics Data