PPDB

The Plant Proteome Database

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AT2G28790.1   Pathogenesis-related thaumatin superfamily protein

Lab Annot. osmotin-like protein, putative
Mapman: 20.2 stress.abiotic
Curated Location
TAIR curated location: cell wall (sensu Magnoliophyta)16287169
Species Arabidopsis thaliana     Source: TAIR Arabidopsis (v.11)
Links TAIR   PeptideAtlas   POGS   SUBA   Uniprot   PTM     Get sequence
Related Genes

AccverSpeciesEvalueMatchlen%Iden%Similar#spotsTargetP
AT2G28790.2 11Arabidopsis thaliana02491001000 (0)_
AT1G75800.1 11Arabidopsis thaliana5E-6525146580 (0)S
AT5G40020.1 11Arabidopsis thaliana1E-6424643571 (1)S
Os01g62260.1 7Oryza sativa5E-10822864774 (4)S
Os10g05660.1 7Oryza sativa1E-6725244590 (0)S
Os06g47600.1 7Oryza sativa9E-6324043570 (0)S
v1_GRMZM2G476523_P01 4a53Zea mays3E-6525042560 (0)S
Zm00001eb226040_P001 agpv5Zea mays3E-6525042560 (0)S
GRMZM2G476523_P01 3.21Zea mays3E-6525042560 (0)S
Show all       

#Spots: The number of publicly accessible spots are in parenthesis

Prediction
PFAM: Thaumatin(1)
TargetP: Secreted (Class 1 C0.060; M0.009; S0.990; _0.009)
Predotar:
Subcel. Location:
TM-HMM prediction: No
Aramemnon:
TAT position:
Length 249 aa (-cTP 232)
Molecular Weight 27.02 kDA(-cTP )
PI 7.61(-cTP )

Experimental Evidence

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View Identified Peptides  

View GeneModel  

Expr*SpotMW nativeMW denaturedpI nativepI denaturedTypeMowseAmbiguityTissueSample fromGenotype
311Detail       leaf [A. thaliana] total leaf tissue clpr2-1:R2-his6
324Detail       leaf [A. thaliana] cell wall enriched wild-type
1417Detail       leaf [A. thaliana] total tissue (2% sucrose) clpr4-1 (rep. 2)
1582Detail       leaf [A. thaliana] TiO2 thylakoid membraneK2K3
2246Detail       seedlings [A. thaliana] total tissue gfs9
2247Detail       seedlings [A. thaliana] total tissue atg5
2248Detail       seedlings [A. thaliana] total tissue wild-type
2251Detail       seedlings [A. thaliana] total tissue wild-type

* For details about the exprimental sources click here.

Published Proteomics Data

17660356(tonoplast (Brassica oleracea buds))
19200160(flower-stage 12)
19546170(mature pollen grains)
18796151(cell wall (hypocotyl))
19525416(leaf (wt and clpr4-1 mutant))
19334764(plasma membrane (cell culture))
WallDB-E.Jamet(cell wall reference proteome)
21533090(plasmodesmata-crude)
21173025(root proteome)

Comparative Proteomics Data


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