PPDB

PPDB	The Plant Proteome Database

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AT2G28760.1 UDP-XYL synthase 6

Lab Annot.

UXS6; catalytic
Mapman: 10.1.5 cell wall.precursor synthesis.UXS

Curated Location

Species

Arabidopsis thaliana Source: TAIR Arabidopsis (v.11)

Links

TAIR PeptideAtlas POGS SUBA Uniprot PTM Get sequence

Related Genes

Acc ver Species Evalue Matchlen %Iden %Similar #spots TargetP
AT2G28760.4 11 Arabidopsis thaliana 0 343 100 100 0 (0) C
AT2G28760.2 11 Arabidopsis thaliana 0 343 100 100 21 (9) C
AT2G28760.3 11 Arabidopsis thaliana 0 343 100 100 20 (8) C
Os03g16980.1 7 Oryza sativa 0 342 87 94 47 (47) C
Os03g16980.2 7 Oryza sativa 0 342 87 94 47 (47) C
Os03g16980.3 7 Oryza sativa 0 293 88 94 20 (20) _
GRMZM2G044027_P02 3.21 Zea mays 0 320 88 95 75 (75) C
GRMZM2G044027_P01 3.21 Zea mays 0 320 88 95 75 (75) C
GRMZM2G165357_P02 3.21 Zea mays 0 320 89 95 71 (71) C
Show all

#Spots: The number of publicly accessible spots are in parenthesis

Prediction

PFAM:	3Beta_HSD(1) adh_short(1) Epimerase(1) GDP_Man_Dehyd(1) KR(1) NAD_binding_4(2) P
TargetP:	Chloroplast (Class 3 C0.736; M0.130; S0.109; _0.286)
Predotar:
Subcel. Location:	Stroma
TM-HMM prediction:	No
Aramemnon:
TAT position:
Length	343 aa (-cTP 292)
Molecular Weight	38.62 kDA(-cTP 33.22)
PI	8.58(-cTP 6.69)

Experimental Evidence

Expand

View Identified Peptides

View GeneModel

Expr*	Spot	MW native	MW denatured	pI native	pI denatured	Type	Mowse	Ambiguity	Tissue	Sample from	Genotype
361	Detail								leaf [A. thaliana]	total leaf tissue 1.07	wild-type
1202	Detail								leaf [A. thaliana]	total leaf tissue	clpp3 null
1418	Detail								leaf [A. thaliana]	total tissue (2% sucrose)	clpr4-1 (rep. 3)
2192	Detail								[A. thaliana]	total soluble	P3-trap-strepII 16
2247	Detail								seedlings [A. thaliana]	total tissue	atg5
2249	Detail								seedlings [A. thaliana]	total tissue	gfs9
2250	Detail								seedlings [A. thaliana]	total tissue	atg5
2251	Detail								seedlings [A. thaliana]	total tissue	wild-type
2252	Detail								seedlings [A. thaliana]	total tissue	gfs9

* For details about the exprimental sources click here.

Published Proteomics Data

15815986(Silique)
17644812(plasma membrane - suspension cells)
19525416(leaf (wt and clpr4-1 mutant))
17216043(leaf)
19334764(plasma membrane (cell culture))
19329564(peroxisomes (leaf))
21173025(root proteome)

Comparative Proteomics Data