PPDB

The Plant Proteome Database

Search PPDB by:

HyperLink
HyperLink
HyperLink
HyperLink
HyperLink
HyperLink
HyperLink
HyperLink
HyperLink HyperLink HyperLink

 

PPDB home page

AT2G28600.1   P-loop containing nucleoside triphosphate hydrolases superfamily protein

Lab Annot.
Mapman: 35.2 not assigned.unknown
Curated Location
Species Arabidopsis thaliana     Source: TAIR Arabidopsis (v.11)
Links TAIR   PeptideAtlas   POGS   SUBA   Uniprot   PTM     Get sequence
Related Genes

AccverSpeciesEvalueMatchlen%Iden%Similar#spotsTargetP
AT5G14610.6 11Arabidopsis thaliana2E-2031426450 (0)_
AT5G14610.2 11Arabidopsis thaliana3E-2031426452 (1)_
AT5G14610.7 11Arabidopsis thaliana3E-2031426450 (0)S
Os12g05230.1 7Oryza sativa4E-9554038550 (0)C
Os01g36860.3 7Oryza sativa3E-19309264525 (25)M
Os01g07740.3 7Oryza sativa3E-1931326440 (0)_
v1_GRMZM2G152561_P02 4a53Zea mays6E-105537385612 (12)C
Zm00001eb164020_P001 agpv5Zea mays6E-10553738560 (0)C
GRMZM2G152561_P02 3.21Zea mays6E-10553738562 (2)C
Show all       

#Spots: The number of publicly accessible spots are in parenthesis

Prediction
PFAM: DEAD(2) DUF4363(3)
TargetP: Cytoplasm (Class 3 C0.295; M0.066; S0.026; _0.784)
Predotar:
Subcel. Location:
TM-HMM prediction: No
Aramemnon:
TAT position:
Length 502 aa (-cTP 464)
Molecular Weight 55.45 kDA(-cTP )
PI 9.09(-cTP )

Experimental Evidence

 

View GeneModel  

* For details about the exprimental sources click here.

Published Proteomics Data

21166475(cytosolic-fractions-crude)

Comparative Proteomics Data


©Klaas J. van Wijk Lab, Cornell University   Web Accessibility Help