PPDB

PPDB	The Plant Proteome Database

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AT2G28450.1 zinc finger (CCCH-type) family protein

Lab Annot.

zinc finger (CCCH-type) protein
Mapman: 27.3.99 RNA.regulation of transcription.unclassified

Curated Location

Species

Arabidopsis thaliana Source: TAIR Arabidopsis (v.11)

Links

TAIR PeptideAtlas POGS SUBA Uniprot PTM Get sequence

Related Genes

Acc ver Species Evalue Matchlen %Iden %Similar #spots TargetP
AT2G28450.2 11 Arabidopsis thaliana 0 809 99 99 1 (1) _
AT3G21300.1 11 Arabidopsis thaliana 3E-17 359 27 40 0 (0) M
Os04g01480.1 7 Oryza sativa 0 867 49 61 0 (0) _
Os01g09750.2 7 Oryza sativa 4E-17 126 38 56 0 (0) M
Os01g09750.1 7 Oryza sativa 4E-17 126 38 56 0 (0) M
v1_GRMZM2G432335_P02 4a53 Zea mays 0 700 51 63 0 (0) _
Zm00001eb418880_P002 agpv5 Zea mays 0 766 46 57 0 (0) _
GRMZM2G147623_P01 3.21 Zea mays 0 690 48 62 1 (1) _
Show all

#Spots: The number of publicly accessible spots are in parenthesis

Prediction

PFAM:	AviRa(1) Lectin_N(1) Methyltransf_11(1) Methyltransf_15(1) Methyltransf_25(1) Me
TargetP:	Cytoplasm (Class 3 C0.222; M0.075; S0.119; _0.771)
Predotar:
Subcel. Location:
TM-HMM prediction:	No
Aramemnon:
TAT position:
Length	809 aa (-cTP 796)
Molecular Weight	89.02 kDA(-cTP )
PI	5.35(-cTP )

Experimental Evidence

Expand

Expr*	Spot	MW native	MW denatured	pI native	pI denatured	Type	Mowse	Ambiguity	Tissue	Sample from	Genotype
1417	Detail								leaf [A. thaliana]	total tissue (2% sucrose)	clpr4-1 (rep. 2)

* For details about the exprimental sources click here.

Published Proteomics Data

19525416(leaf (wt and clpr4-1 mutant))
20706207(cell cycle interactome (cell culture))
19114538(guard cells Arabidopsis leaf)
20813957(SUMO proteome)

Comparative Proteomics Data