PPDB

The Plant Proteome Database

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AT2G28390.1   SAND family protein

Lab Annot. SAND protein
Mapman: 35.1 not assigned.no ontology
Curated Location
Species Arabidopsis thaliana     Source: TAIR Arabidopsis (v.11)
Links TAIR   PeptideAtlas   POGS   SUBA   Uniprot   PTM     Get sequence
Related Genes

AccverSpeciesEvalueMatchlen%Iden%Similar#spotsTargetP
Os01g74460.2 7Oryza sativa4E-13127368790 (0)_
Os01g74460.1 7Oryza sativa4E-13127368790 (0)_
Zm00001eb139700_P004 agpv5Zea mays050064780 (0)_
GRMZM2G179732_P02 3.21Zea mays0443688310 (0)_
Zm00001eb139700_P003 agpv5Zea mays042666810 (0)C
Show all       

#Spots: The number of publicly accessible spots are in parenthesis

Prediction
PFAM: Fuz_longin_1(1) Fuz_longin_2(1) Fuz_longin_3(1)
TargetP: Chloroplast (Class 3 C0.837; M0.033; S0.059; _0.435)
Predotar:
Subcel. Location: Stroma
TM-HMM prediction: No
Aramemnon:
TAT position:
Length 607 aa (-cTP 569)
Molecular Weight 66.92 kDA(-cTP 62.87)
PI 5.15(-cTP 5.42)

Experimental Evidence

Expand

View Identified Peptides  

View GeneModel  

Expr*SpotMW nativeMW denaturedpI nativepI denaturedTypeMowseAmbiguityTissueSample fromGenotype
1202Detail       leaf [A. thaliana] total leaf tissue clpp3 null
1207Detail       leaf [A. thaliana] total leaf tissue clpp3 null
1408Detail       leaf [A. thaliana] total leaf tissue 1.07 rep 2. clpr2-1
1931Detail       leaf [A. thaliana] total leaf tissue DXS_Flag

* For details about the exprimental sources click here.

Published Proteomics Data

18463617(suspension cells-phosphorylated proteins)
19376835(leaf phosphoproteins)
20733066(phosphoproteome-ABA-leaf)
21768351(Leaf-Phosphoproteome)
21433285(Crude microsomes cell_cultures)

Comparative Proteomics Data


©Klaas J. van Wijk Lab, Cornell University   Web Accessibility Help