PPDB

PPDB	The Plant Proteome Database

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AT2G28290.1 P-loop containing nucleoside triphosphate hydrolases superfamily protein

Lab Annot.

P-loop containing nucleoside triphosphate hydrolase
Mapman: 28.1 DNA.synthesis/chromatin structure

Curated Location

TAIR curated location: nucleus16640604

Species

Arabidopsis thaliana Source: TAIR Arabidopsis (v.11)

Links

TAIR PeptideAtlas POGS SUBA PTM Get sequence

Related Genes

Acc ver Species Evalue Matchlen %Iden %Similar #spots TargetP
AT2G28290.5 11 Arabidopsis thaliana 0 3575 99 99 0 (0) _
AT2G28290.4 11 Arabidopsis thaliana 0 3574 99 99 0 (0) _
AT2G28290.3 11 Arabidopsis thaliana 0 3574 99 99 19 (11) _
Os05g05230.1 7 Oryza sativa 0 782 42 62 0 (0) C
Os02g02290.1 7 Oryza sativa 8E-138 888 36 52 15 (15) C
Os05g05780.1 7 Oryza sativa 7E-127 486 48 63 0 (0) _
Zm00001eb280740_P005 agpv5 Zea mays 0 1046 71 81 0 (0) C
Zm00001eb280740_P004 agpv5 Zea mays 0 1046 71 81 0 (0) _
Zm00001eb280740_P002 agpv5 Zea mays 0 1046 71 81 0 (0) _
Show all

#Spots: The number of publicly accessible spots are in parenthesis

Prediction

PFAM:	DEAD(1) DEAD_2(1) DFF40(1) Helicase_C(1) HOOK_N(5) ResIII(1) SnAC(1) SNF2_N(1) T
TargetP:	Cytoplasm (Class 2 C0.123; M0.078; S0.076; _0.841)
Predotar:
Subcel. Location:
TM-HMM prediction:	No
Aramemnon:
TAT position:
Length	3574 aa (-cTP 3536)
Molecular Weight	389.86 kDA(-cTP )
PI	4.76(-cTP )

Experimental Evidence

Expand

View Identified Peptides

View GeneModel

Expr*	Spot	MW native	MW denatured	pI native	pI denatured	Type	Mowse	Ambiguity	Tissue	Sample from	Genotype
1421	Detail								leaf [A. thaliana]	total leaf tissue	wild-type (rep. 1)
1423	Detail								leaf [A. thaliana]	total leaf tissue	wild-type (rep. 3)
1426	Detail								leaf [A. thaliana]	total leaf tissue	prep1xprep2xt1xt2 (rep. 3)
1439	Detail								leaf [A. thaliana]	total tissue (0 day HL)	wild-type (rep. 1)
1440	Detail								leaf [A. thaliana]	total tissue (0 day HL)	wild-type (rep. 2)
1442	Detail								leaf [A. thaliana]	total tissue (0 day HL)	abck2xabck3 (rep. 1)
1443	Detail								leaf [A. thaliana]	total tissue (0 day HL)	abck2xabck3 (rep. 2)
1529	Detail								leaf [A. thaliana]	total leaf tissue - 0 uM CAP	wild-type (rep. 1)
2289	Detail								[A. thaliana]		Clp C1 TRAP
2299	Detail								[A. thaliana]		Clp C1 TRAP
2325	Detail								leaf [A. thaliana]	thylakoids thylakoid membrane	abc1k6

* For details about the exprimental sources click here.

Published Proteomics Data

15276459(epidermis)
19376835(leaf phosphoproteins)
19114538(guard cells Arabidopsis leaf)
22060019(phosphoproteome - N-starved seedlings)
20733066(phosphoproteome-ABA-leaf)
21768351(Leaf-Phosphoproteome)

Comparative Proteomics Data