PPDB

The Plant Proteome Database

Search PPDB by:

HyperLink
HyperLink
HyperLink
HyperLink
HyperLink
HyperLink
HyperLink
HyperLink
HyperLink HyperLink HyperLink

 

PPDB home page

AT2G28230.1   TATA-binding related factor (TRF) of subunit 20 of Mediator complex

Lab Annot.
Mapman: 35.2 not assigned.unknown
Curated Location
Species Arabidopsis thaliana     Source: TAIR Arabidopsis (v.11)
Links TAIR   PeptideAtlas   POGS   SUBA   Uniprot   PTM     Get sequence
Related Genes

AccverSpeciesEvalueMatchlen%Iden%Similar#spotsTargetP
AT4G09070.1 11Arabidopsis thaliana3E-13021976890 (0)_
AT2G28230.2 11Arabidopsis thaliana1E-1241701001000 (0)_
AT2G28020.1 11Arabidopsis thaliana6E-387091920 (0)_
Os09g27140.2 7Oryza sativa7E-8722851737 (7)_
Os09g27140.1 7Oryza sativa7E-8722851737 (7)_
Zm00001eb314270_P001 agpv5Zea mays1E-8822452750 (0)_
v1_GRMZM2G126131_P01 4a53Zea mays1E-8822452750 (0)_
Zm00001eb314270_P003 agpv5Zea mays1E-8421951740 (0)_
Show all       

#Spots: The number of publicly accessible spots are in parenthesis

Prediction
PFAM: Med20(1)
TargetP: Cytoplasm (Class 3 C0.089; M0.208; S0.046; _0.650)
Predotar:
Subcel. Location:
TM-HMM prediction: No
Aramemnon:
TAT position:
Length 219 aa (-cTP 201)
Molecular Weight 25.13 kDA(-cTP )
PI 7.79(-cTP )

Experimental Evidence

 

View GeneModel  

* For details about the exprimental sources click here.

Published Proteomics Data

Comparative Proteomics Data


©Klaas J. van Wijk Lab, Cornell University   Web Accessibility Help