PPDB

PPDB	The Plant Proteome Database

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AT2G28050.1 Pentatricopeptide repeat (PPR) superfamily protein

Lab Annot.

Pentatricopeptide repeat (PPR) protein
Mapman: 27.6* RNA.pentatricopeptide (PPR) repeat-containing protein

Curated Location

Species

Arabidopsis thaliana Source: TAIR Arabidopsis (v.11)

Links

TAIR PeptideAtlas POGS SUBA Uniprot PTM Get sequence

Related Genes

Acc ver Species Evalue Matchlen %Iden %Similar #spots TargetP
AT2G32630.1 11 Arabidopsis thaliana 5E-58 458 29 55 0 (0) M
AT1G09820.1 11 Arabidopsis thaliana 3E-27 391 25 47 0 (0) C
AT1G19290.2 11 Arabidopsis thaliana 4E-27 391 25 45 0 (0) M
Os07g47470.1 7 Oryza sativa 3E-36 355 28 50 0 (0) C
Os05g19390.1 7 Oryza sativa 4E-30 441 24 46 0 (0) M
Os06g36910.1 7 Oryza sativa 3E-29 365 25 47 0 (0) M
Zm00001eb111150_P001 agpv5 Zea mays 6E-31 340 26 49 0 (0) M
v1_GRMZM2G422171_P01 4a53 Zea mays 6E-29 332 25 48 0 (0) M
GRMZM2G422171_P02 3.21 Zea mays 1E-27 302 25 50 0 (0) M
Show all

#Spots: The number of publicly accessible spots are in parenthesis

Prediction

PFAM:	DUF3368(3) ECSIT(2) Mtf2(3) PPR(8) PPR_1(7) PPR_2(8) PPR_3(6) PPR_long(3)
TargetP:	Cytoplasm (Class 5 C0.026; M0.350; S0.015; _0.447)
Predotar:
Subcel. Location:
TM-HMM prediction:	No
Aramemnon:	1 TMs
TAT position:
Length	462 aa (-cTP 427)
Molecular Weight	52.93 kDA(-cTP )
PI	5.44(-cTP )

Experimental Evidence

Expand

Expr*	Spot	MW native	MW denatured	pI native	pI denatured	Type	Mowse	Ambiguity	Tissue	Sample from	Genotype
291	Detail								leaf [Zea Mays]	plastid stroma

* For details about the exprimental sources click here.

Published Proteomics Data

22060019(phosphoproteome - N-starved seedlings)

Comparative Proteomics Data