PPDB

The Plant Proteome Database

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AT2G27940.1   RING/U-box superfamily protein

Lab Annot. RING/U-box protein
Mapman: 29.5.11.4.2 protein.degradation.ubiquitin.E3.RING
Curated Location
Species Arabidopsis thaliana     Source: TAIR Arabidopsis (v.11)
Links TAIR   PeptideAtlas   POGS   SUBA   Uniprot   PTM     Get sequence
Related Genes

AccverSpeciesEvalueMatchlen%Iden%Similar#spotsTargetP
AT3G05200.1 11Arabidopsis thaliana6E-3015337551 (1)S
AT5G27420.1 11Arabidopsis thaliana2E-2614535570 (0)S
AT4G40070.1 11Arabidopsis thaliana4E-2615639570 (0)M
Os09g29310.1 7Oryza sativa3E-2817334520 (0)S
Os08g37760.1 7Oryza sativa1E-2516535520 (0)M
Os02g57460.1 7Oryza sativa6E-2315535540 (0)_
GRMZM2G082653_P01 3.21Zea mays6E-3016939541 (1)_
Zm00001eb315600_P001 agpv5Zea mays6E-3016939540 (0)_
v1_GRMZM2G082653_P01 4a53Zea mays6E-3016939540 (0)_
Show all       

#Spots: The number of publicly accessible spots are in parenthesis

Prediction
PFAM: DC_STAMP(1) FANCL_C(2) Ost5(1) Prok-RING_1(2) Prok-RING_4(1) RINGv(1) Tmpp129(2)
TargetP: Cytoplasm (Class 3 C0.044; M0.142; S0.002; _0.696)
Predotar:
Subcel. Location:
TM-HMM prediction: 1 TMs
Aramemnon: 1 TMs
TAT position:
Length 237 aa (-cTP 165)
Molecular Weight 26.48 kDA(-cTP )
PI 6.58(-cTP )

Experimental Evidence

 

View GeneModel  

* For details about the exprimental sources click here.

Published Proteomics Data

Comparative Proteomics Data


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