PPDB

The Plant Proteome Database

Search PPDB by:

HyperLink
HyperLink
HyperLink
HyperLink
HyperLink
HyperLink
HyperLink
HyperLink
HyperLink HyperLink HyperLink

 

PPDB home page

AT2G27900.1   coiled-coil protein

Lab Annot.
Mapman: 35.2 not assigned.unknown
Curated Location
Species Arabidopsis thaliana     Source: TAIR Arabidopsis (v.11)
Links TAIR   PeptideAtlas   POGS   SUBA   Uniprot   PTM     Get sequence
Related Genes

AccverSpeciesEvalueMatchlen%Iden%Similar#spotsTargetP
AT2G27900.2 11Arabidopsis thaliana011241001000 (0)_
Os10g39910.1 7Oryza sativa0109556722 (2)_
Zm00001eb022740_P001 agpv5Zea mays0108955700 (0)C
Zm00001eb022740_P002 agpv5Zea mays093155700 (0)_
v1_GRMZM2G424595_P01 4a53Zea mays087050650 (0)C
Show all       

#Spots: The number of publicly accessible spots are in parenthesis

Prediction
PFAM: DUF2451(2) Vps54(2) Vps54_N(1)
TargetP: Cytoplasm (Class 2 C0.013; M0.024; S0.119; _0.848)
Predotar:
Subcel. Location:
TM-HMM prediction: No
Aramemnon:
TAT position:
Length 1124 aa (-cTP 1093)
Molecular Weight 124.91 kDA(-cTP )
PI 5.54(-cTP )

Experimental Evidence

 

View GeneModel  

* For details about the exprimental sources click here.

Published Proteomics Data

21166475(cytosolic-fractions-crude)

Comparative Proteomics Data


©Klaas J. van Wijk Lab, Cornell University   Web Accessibility Help