PPDB

The Plant Proteome Database

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AT2G27775.1   PPR containing protein

Lab Annot. IPT2 -adenylate isopentenyltransferase
Mapman: 17.4.1 hormone metabolism.cytokinin.synthesis-degradation
Curated Location cytosol (Pubmed: 14726522 )
Species Arabidopsis thaliana     Source: TAIR Arabidopsis (v.11)
Links TAIR   PeptideAtlas   POGS   SUBA   Uniprot   Uniprot   PTM     Get sequence
Related Genes

AccverSpeciesEvalueMatchlen%Iden%Similar#spotsTargetP
AT2G27775.2 11Arabidopsis thaliana2E-59911001001 (1)C
AT2G27800.1 11Arabidopsis thaliana6E-119349610 (0)M
AT5G27300.1 11Arabidopsis thaliana1E-087647600 (0)M
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#Spots: The number of publicly accessible spots are in parenthesis

Prediction
PFAM:
TargetP: Chloroplast (Class 3 C0.935; M0.465; S0.002; _0.004)
Predotar:
Subcel. Location: Stroma
TM-HMM prediction: No
Aramemnon:
TAT position:
Length 100 aa (-cTP 56)
Molecular Weight 10.88 kDA(-cTP 6.15)
PI 11.86(-cTP 9.31)

Experimental Evidence

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View Identified Peptides  

View GeneModel  

Expr*SpotMW nativeMW denaturedpI nativepI denaturedTypeMowseAmbiguityTissueSample fromGenotype
1417Detail       leaf [A. thaliana] total tissue (2% sucrose) clpr4-1 (rep. 2)

* For details about the exprimental sources click here.

Published Proteomics Data

17216043(leaf)

Comparative Proteomics Data


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