PPDB

 The Plant Proteome Database

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AT2G27710.4   60S acidic ribosomal protein family
Lab Annot. 60S acidic ribosomal protein P2 (RPP2B)
Mapman: 29.2.1.2.2.82 protein.synthesis.ribosomal protein.eukaryotic.60S subunit.P2
Curated Location cytosol
Species Arabidopsis thaliana     Source: TAIR Arabidopsis (v.11)
Links PeptideAtlas   POGS   Uniprot   PTM     Get sequence
Related Genes

AccverSpeciesEvalueMatchlen%Iden%Similar#spotsTargetP
AT2G27720.1 11Arabidopsis thaliana8E-351157980291 (218)S
AT2G27710.1 11Arabidopsis thaliana2E-3465100100323 (242)S
AT2G27710.2 11Arabidopsis thaliana2E-3465100100323 (242)S
Os05g37330.1 7Oryza sativa1E-25113607032 (32)S
Os01g09510.1 7Oryza sativa3E-25114577132 (32)S
Os01g09510.4 7Oryza sativa3E-25114577115 (15)S
v1_GRMZM2G114954_P01 4a53Zea mays1E-28113607464 (63)S
Zm00001eb348240_P004 agpv5Zea mays1E-2811360740 (0)S
Zm00001eb348240_P001 agpv5Zea mays1E-2811360740 (0)S
Show all       

#Spots: The number of publicly accessible spots are in parenthesis
Prediction
PFAM: Ribosomal_60s(1)
TargetP: Secreted (Class 3 C0.121; M0.095; S0.635; _0.141)
Predotar:
Subcel. Location:
TM-HMM prediction: No
Aramemnon:
TAT position:
Length 98 aa (-cTP 94)
Molecular Weight 10.24 kDA(-cTP )
PI 4.67(-cTP )

Experimental Evidence

Expand

View Identified Peptides  

View GeneModel  
Expr*SpotMW nativeMW denaturedpI nativepI denaturedTypeMowseAmbiguityTissueSample fromGenotype
1393Detail       leaf [A. thaliana] total leaf tissue wild-type (rep. 2)
1394Detail       leaf [A. thaliana] total leaf tissue wild-type (rep. 1)
1399Detail       leaf [A. thaliana] total leaf tissue 1.14 -rep. 1 clpp3-1
1405Detail       leaf [A. thaliana] total leaf tissue 1.07 rep 2. wild-type
1406Detail       leaf [A. thaliana] total leaf tissue 1.07 rep 2. wild-type
1407Detail       leaf [A. thaliana] total leaf tissue 1.07 rep 2. clpr2-1
1408Detail       leaf [A. thaliana] total leaf tissue 1.07 rep 2. clpr2-1
1413Detail       leaf [A. thaliana] total leaf tissue -114 rep1tR1 wild-type
1414Detail       leaf [A. thaliana] total leaf tissue -114 rep1tR2 wild-type
1427Detail        [A. thaliana] total leaf tissue 1.11 wild-type
1428Detail        [A. thaliana] total leaf tissue 1.11 Prep1_Prep2_t1_t2
1453Detail       leaf [A. thaliana] chloroplast nucleoidwild-type (rep. 1)
1507Detail        [A. thaliana] wild-type
1508Detail        [A. thaliana]  
1519Detail       leaf [A. thaliana] wild-type
1529Detail       leaf [A. thaliana] total leaf tissue - 0 uM CAP wild-type (rep. 1)
1531Detail       leaf [A. thaliana] total leaf tissue - 40 uM CAP wild-type (rep. 1)
1532Detail       leaf [A. thaliana] total leaf tissue - 0 uM CAP clps (rep. 1)
1596Detail        [A. thaliana]  
1612Detail       Natural Senescence leaf [A. thaliana] chloroplast fractionation thylakoid membrane 
1620Detail        [A. thaliana] m48
1756Detail       leaf [A. thaliana] total leaf tissue Col_0
1766Detail       leaf [A. thaliana] Thylakoids thylakoid membraneMet1-1
1930Detail       leaf [A. thaliana] total leaf tissue Col_0 Wild-type
2008Detail       leaf [A. thaliana] RNAi PG plastoglobuleRNAi
2028Detail       leaf [A. thaliana] WT PG plastoglobuleWT
2030Detail       leaf [A. thaliana] over expressed M48 plastoglobuleM48
2236Detail       seedlings [A. thaliana] total tissue gfs9
2237Detail       seedlings [A. thaliana] total tissue gfs9
2238Detail       seedlings [A. thaliana] total tissue gfs9
2240Detail       seedlings [A. thaliana] total tissue gfs9
2241Detail       seedlings [A. thaliana] total tissue gfs9
2242Detail       seedlings [A. thaliana] total tissue gfs9
2243Detail       seedlings [A. thaliana] total tissue gfs9
2245Detail       seedlings [A. thaliana] total tissue wild-type
2246Detail       seedlings [A. thaliana] total tissue gfs9
2247Detail       seedlings [A. thaliana] total tissue atg5
2248Detail       seedlings [A. thaliana] total tissue wild-type
2249Detail       seedlings [A. thaliana] total tissue gfs9
2250Detail       seedlings [A. thaliana] total tissue atg5
2251Detail       seedlings [A. thaliana] total tissue wild-type
2252Detail       seedlings [A. thaliana] total tissue gfs9
2253Detail       seedlings [A. thaliana] total tissue atg5
2254Detail       leaf [A. thaliana] total seedlings gfs9
2255Detail       leaf [A. thaliana] total seedlings gfs9
2256Detail       leaf [A. thaliana] total seedlings gfs9
2257Detail       leaf [A. thaliana] total seedlings gfs9
2258Detail       leaf [A. thaliana] total seedlings gfs9
2259Detail       leaf [A. thaliana] total seedlings gfs9
2287Detail        [A. thaliana] Clp C1 WT

* For details about the exprimental sources click here.

Published Proteomics Data

 22060019(phosphoproteome - N-starved seedlings)
21311031(chloroplasts)
21325567(root-proteome (wt & det3))
21166475(cytosolic-fractions-crude)
21166475(cytosol-enriched&curated)
20733066(phosphoproteome-ABA-leaf)
21173025(root proteome)
22430844(Golgi-cell-culture)
21189294(nuclear pore complex (co-IPs RAE1,Nup43,50a,93a,136))

Comparative Proteomics Data

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