PPDB

PPDB	The Plant Proteome Database

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AT2G27610.1 Tetratricopeptide repeat (TPR)-like superfamily protein

Lab Annot.

Mapman: 35.1.5 not assigned.no ontology.pentatricopeptide (PPR) repeat-containing protein

Curated Location

Species

Arabidopsis thaliana Source: TAIR Arabidopsis (v.11)

Links

TAIR PeptideAtlas POGS SUBA Uniprot PTM Get sequence

Related Genes

Acc ver Species Evalue Matchlen %Iden %Similar #spots TargetP
AT4G13650.1 11 Arabidopsis thaliana 0 827 36 57 1 (1) _
AT5G13230.1 11 Arabidopsis thaliana 0 783 38 56 3 (3) M
AT3G57430.1 11 Arabidopsis thaliana 0 847 36 58 0 (0) C
Os05g38190.2 7 Oryza sativa 0 821 52 71 0 (0) M
Os09g07780.1 7 Oryza sativa 0 828 37 57 0 (0) M
Os01g25270.1 7 Oryza sativa 0 828 37 57 0 (0) M
v1_GRMZM2G153275_P02 4a53 Zea mays 0 832 37 59 0 (0) _
GRMZM2G153275_P01 3.21 Zea mays 0 832 37 59 0 (0) _
GRMZM2G153275_P02 3.21 Zea mays 0 832 37 59 0 (0) _
Show all

#Spots: The number of publicly accessible spots are in parenthesis

Prediction

PFAM:	ANAPC3(3) DUF1216(2) DYW_deaminase(1) PPR(13) PPR_1(13) PPR_2(13) PPR_3(10) PPR_
TargetP:	Mitochondria (Class 5 C0.096; M0.596; S0.017; _0.432)
Predotar:
Subcel. Location:
TM-HMM prediction:	No
Aramemnon:
TAT position:
Length	868 aa (-cTP 845)
Molecular Weight	97.18 kDA(-cTP )
PI	8.79(-cTP )

Experimental Evidence

Expand

View Identified Peptides

View GeneModel

Expr*	Spot	MW native	MW denatured	pI native	pI denatured	Type	Mowse	Ambiguity	Tissue	Sample from	Genotype
1584	Detail								[A. thaliana]
1585	Detail								[A. thaliana]
1586	Detail								[A. thaliana]

* For details about the exprimental sources click here.

Published Proteomics Data

19546170(mature pollen grains)
20706207(contaminants cell cycle interactome (cell culture))

Comparative Proteomics Data