PPDB

The Plant Proteome Database

Search PPDB by:

HyperLink
HyperLink
HyperLink
HyperLink
HyperLink
HyperLink
HyperLink
HyperLink
HyperLink HyperLink HyperLink

 

PPDB home page

AT2G27520.1   F-box and associated interaction domains-containing protein

Lab Annot. F-box and associated interaction domains-containing protein
Mapman: 29.5.11.4.3.2 protein.degradation.ubiquitin.E3.SCF.FBOX
Curated Location
Species Arabidopsis thaliana     Source: TAIR Arabidopsis (v.11)
Links TAIR   PeptideAtlas   POGS   SUBA   Uniprot   PTM     Get sequence
Related Genes

AccverSpeciesEvalueMatchlen%Iden%Similar#spotsTargetP
AT3G17490.1 11Arabidopsis thaliana4E-7538142560 (0)_
AT2G04920.1 11Arabidopsis thaliana5E-7437242560 (0)_
AT3G17540.1 11Arabidopsis thaliana7E-7038338550 (0)_
Os09g27660.3 7Oryza sativa6E-1232924390 (0)M
Os09g27660.1 7Oryza sativa6E-1232924390 (0)M
Os09g27660.2 7Oryza sativa6E-1232924390 (0)M
Zm00001eb143020_P002 agpv5Zea mays7E-0823624440 (0)_
v1_GRMZM2G119650_P01 4a53Zea mays8E-0823624440 (0)_
Zm00001eb143020_P001 agpv5Zea mays8E-0823624440 (0)_
Show all       

#Spots: The number of publicly accessible spots are in parenthesis

Prediction
PFAM: DUF4784(1) F-box(1) F-box-like(2) FBA_1(1)
TargetP: Cytoplasm (Class 3 C0.039; M0.195; S0.082; _0.711)
Predotar:
Subcel. Location:
TM-HMM prediction: No
Aramemnon:
TAT position:
Length 347 aa (-cTP 280)
Molecular Weight 40.53 kDA(-cTP )
PI 8.78(-cTP )

Experimental Evidence

 

View GeneModel  

* For details about the exprimental sources click here.

Published Proteomics Data

Comparative Proteomics Data


©Klaas J. van Wijk Lab, Cornell University   Web Accessibility Help