PPDB

The Plant Proteome Database

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AT2G27460.1   sec23/sec24 transport family protein

Lab Annot. sec23/sec24 transport protein
Mapman: 29.3.4.2 protein.targeting.secretory pathway.golgi
Curated Location
Species Arabidopsis thaliana     Source: TAIR Arabidopsis (v.11)
Links TAIR   PeptideAtlas   POGS   SUBA   Uniprot   PTM     Get sequence
Related Genes

AccverSpeciesEvalueMatchlen%Iden%Similar#spotsTargetP
AT3G07100.1 11Arabidopsis thaliana2E-215732240181 (83)C
AT2G21630.1 11Arabidopsis thaliana3E-1771922361 (1)_
AT3G44340.1 11Arabidopsis thaliana1E-15543233861 (32)C
Os05g37120.1 7Oryza sativa074867810 (0)S
Os04g33690.1 7Oryza sativa074759747 (7)C
Os05g37120.2 6Oryza sativa047270830 (0)S
Zm00001eb288910_P001 agpv5Zea mays074666800 (0)_
Zm00001eb348320_P002 agpv5Zea mays074865790 (0)_
Zm00001eb421940_P002 agpv5Zea mays074658750 (0)_
Show all       

#Spots: The number of publicly accessible spots are in parenthesis

Prediction
PFAM: Sec23_BS(1) Sec23_helical(1) Sec23_trunk(1) zf-Sec23_Sec24(1)
TargetP: Cytoplasm (Class 2 C0.105; M0.099; S0.069; _0.802)
Predotar:
Subcel. Location:
TM-HMM prediction: No
Aramemnon:
TAT position:
Length 745 aa (-cTP 730)
Molecular Weight 82.58 kDA(-cTP )
PI 4.80(-cTP )

Experimental Evidence

Expand

View Identified Peptides  

View GeneModel  

Expr*SpotMW nativeMW denaturedpI nativepI denaturedTypeMowseAmbiguityTissueSample fromGenotype
527Detail       leaf [A. thaliana] total leaf tissue wild-type (wt1)
1417Detail       leaf [A. thaliana] total tissue (2% sucrose) clpr4-1 (rep. 2)
1418Detail       leaf [A. thaliana] total tissue (2% sucrose) clpr4-1 (rep. 3)

* For details about the exprimental sources click here.

Published Proteomics Data

19546170(mature pollen grains)
19525416(leaf (wt and clpr4-1 mutant))
21166475(cytosolic-fractions-crude)
21433285(Crude microsomes cell_cultures)

Comparative Proteomics Data


©Klaas J. van Wijk Lab, Cornell University   Web Accessibility Help