PPDB

The Plant Proteome Database

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AT2G27370.1   Uncharacterized protein family (UPF0497)

Lab Annot. unknown protein (UPF0497)
Mapman: 35.1 not assigned.no ontology
Curated Location
Species Arabidopsis thaliana     Source: TAIR Arabidopsis (v.11)
Links TAIR   PeptideAtlas   POGS   SUBA   Uniprot   PTM     Get sequence
Related Genes

AccverSpeciesEvalueMatchlen%Iden%Similar#spotsTargetP
AT2G36100.1 11Arabidopsis thaliana5E-6416962738 (8)_
AT5G06200.1 11Arabidopsis thaliana3E-6017361780 (0)_
AT3G11550.1 11Arabidopsis thaliana2E-5516761770 (0)_
Os06g12500.1 7Oryza sativa2E-5517950680 (0)_
Os04g38690.1 7Oryza sativa3E-5318451640 (0)_
Os08g01160.1 7Oryza sativa5E-4716847670 (0)_
Zm00001eb372230_P001 agpv5Zea mays6E-5215853680 (0)_
v1_GRMZM2G110832_P01 4a53Zea mays6E-5215853680 (0)_
GRMZM2G110832_P01 3.21Zea mays6E-5215853680 (0)_
Show all       

#Spots: The number of publicly accessible spots are in parenthesis

Prediction
PFAM: DUF588(1)
TargetP: Cytoplasm (Class 1 C0.063; M0.091; S0.027; _0.957)
Predotar:
Subcel. Location:
TM-HMM prediction: 4 TMs
Aramemnon: 4 TMs
TAT position:
Length 221 aa (-cTP 148)
Molecular Weight 24.16 kDA(-cTP )
PI 8.93(-cTP )

Experimental Evidence

Expand

View Identified Peptides  

View GeneModel  

Expr*SpotMW nativeMW denaturedpI nativepI denaturedTypeMowseAmbiguityTissueSample fromGenotype
324Detail       leaf [A. thaliana] cell wall enriched wild-type

* For details about the exprimental sources click here.

Published Proteomics Data

19253305(phosphoproteins (etiolated seedling))
21173025(root proteome)

Comparative Proteomics Data


©Klaas J. van Wijk Lab, Cornell University   Web Accessibility Help