PPDB

The Plant Proteome Database

Search PPDB by:

HyperLink
HyperLink
HyperLink
HyperLink
HyperLink
HyperLink
HyperLink
HyperLink
HyperLink HyperLink HyperLink

 

PPDB home page

AT2G27270.1   transmembrane protein

Lab Annot.
Mapman: 35.2 not assigned.unknown
Curated Location
Species Arabidopsis thaliana     Source: TAIR Arabidopsis (v.11)
Links TAIR   PeptideAtlas   POGS   SUBA   Uniprot   PTM     Get sequence
Related Genes

AccverSpeciesEvalueMatchlen%Iden%Similar#spotsTargetP
AT4G01410.1 11Arabidopsis thaliana1E-0717325461 (1)_
AT3G11660.1 11Arabidopsis thaliana6E-0618521421 (1)M
AT5G06330.1 11Arabidopsis thaliana7E-0615524430 (0)_
Os04g33990.1 7Oryza sativa3E-1017526444 (4)S
Os02g33550.1 7Oryza sativa4E-10163284727 (27)_
v1_GRMZM2G120983_P01 4a53Zea mays3E-09175244312 (12)S
GRMZM5G800014_P01 3.21Zea mays3E-09175244316 (16)S
Zm00001eb083540_P001 agpv5Zea mays3E-0917524430 (0)S
Show all       

#Spots: The number of publicly accessible spots are in parenthesis

Prediction
PFAM: DUF4118(1) FixS(1)
TargetP: Cytoplasm (Class 2 C0.080; M0.170; S0.021; _0.920)
Predotar:
Subcel. Location:
TM-HMM prediction: 1 TMs
Aramemnon: 1 TMs
TAT position:
Length 231 aa (-cTP 204)
Molecular Weight 26.14 kDA(-cTP )
PI 9.69(-cTP )

Experimental Evidence

 

View GeneModel  

* For details about the exprimental sources click here.

Published Proteomics Data

Comparative Proteomics Data


©Klaas J. van Wijk Lab, Cornell University   Web Accessibility Help