PPDB

The Plant Proteome Database

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AT2G27040.1   Argonaute family protein

Lab Annot. argonaute 1 (AGO1)
Mapman: 27.3.36 RNA.regulation of transcription.Argonaute
Curated Location
Species Arabidopsis thaliana     Source: TAIR Arabidopsis (v.11)
Links TAIR   PeptideAtlas   POGS   SUBA   Uniprot   PTM     Get sequence
Related Genes

AccverSpeciesEvalueMatchlen%Iden%Similar#spotsTargetP
AT2G27040.2 11Arabidopsis thaliana092410010015 (7)_
AT5G21150.1 11Arabidopsis thaliana090966810 (0)_
AT5G21030.2 11Arabidopsis thaliana090660740 (0)C
Os04g06770.2 7Oryza sativa0873678230 (30)_
Os04g06770.1 7Oryza sativa0873678230 (30)_
Os01g16870.4 7Oryza sativa0891678111 (11)_
Zm00001eb128780_P003 agpv5Zea mays091666810 (0)_
Zm00001eb128780_P001 agpv5Zea mays091666810 (0)_
Zm00001eb128780_P002 agpv5Zea mays091666810 (0)_
Show all       

#Spots: The number of publicly accessible spots are in parenthesis

Prediction
PFAM: ArgoL1(1) ArgoL2(1) ArgoMid(1) ArgoN(1) PAZ(1) Piwi(1)
TargetP: Cytoplasm (Class 4 C0.510; M0.056; S0.075; _0.770)
Predotar:
Subcel. Location:
TM-HMM prediction: No
Aramemnon:
TAT position:
Length 924 aa (-cTP 870)
Molecular Weight 102.84 kDA(-cTP )
PI 9.05(-cTP )

Experimental Evidence

Expand

View Identified Peptides  

View GeneModel  

Expr*SpotMW nativeMW denaturedpI nativepI denaturedTypeMowseAmbiguityTissueSample fromGenotype
451Detail       leaf [A. thaliana] total leaf tissue clpr4-1
1113Detail        [A. thaliana] control for RARE-1 co-IP wild-type
1114Detail        [A. thaliana] RARE1 co-IP rare-1
1399Detail       leaf [A. thaliana] total leaf tissue 1.14 -rep. 1 clpp3-1
1408Detail       leaf [A. thaliana] total leaf tissue 1.07 rep 2. clpr2-1
1417Detail       leaf [A. thaliana] total tissue (2% sucrose) clpr4-1 (rep. 2)
1421Detail       leaf [A. thaliana] total leaf tissue wild-type (rep. 1)
1426Detail       leaf [A. thaliana] total leaf tissue prep1xprep2xt1xt2 (rep. 3)
1531Detail       leaf [A. thaliana] total leaf tissue - 40 uM CAP wild-type (rep. 1)
1533Detail       leaf [A. thaliana] total leaf tissue - 30 uM CAP clps (rep. 1)

* For details about the exprimental sources click here.

Published Proteomics Data

15815986(Silique)
19200160(flower-stage 12)
19525416(leaf (wt and clpr4-1 mutant))
19114538(guard cells Arabidopsis leaf)
21166475(cytosolic-fractions-crude)
20733066(phosphoproteome-ABA-leaf)
21768351(Leaf-Phosphoproteome)

Comparative Proteomics Data


©Klaas J. van Wijk Lab, Cornell University   Web Accessibility Help