PPDB

 The Plant Proteome Database

Search PPDB by:

HyperLink
HyperLink
HyperLink
HyperLink
HyperLink
HyperLink
HyperLink
HyperLink
HyperLink HyperLink HyperLink

 

PPDB home page

AT2G27030.2   encodes a calmodulin that has higher affinity to kinesin-like calmodulin binding motor protein than CAM4 or CAM6.
Lab Annot. calmodulin 2 - CAM2
Mapman: 30.3 signalling.calcium
Curated Location not plastid (supported by in-house exprements)
Species Arabidopsis thaliana     Source: TAIR Arabidopsis (v.10)
Links TAIR   POGS   SUBA   Uniprot   Uniprot   PTM     Get sequence
Related Genes

AccverSpeciesEvalueMatchlen%Iden%Similar#spotsTargetP
AT2G27030.3 11Arabidopsis thaliana5E-78113100100261 (147)_
AT3G43810.3 11Arabidopsis thaliana8E-78113991000 (0)_
AT3G43810.4 11Arabidopsis thaliana8E-78113991000 (0)_
Os07g48780.2 7Oryza sativa8E-78113991007 (7)_
Os07g48780.1 7Oryza sativa2E-771139910040 (40)_
Os03g20370.1 7Oryza sativa2E-771139910040 (40)_
GRMZM2G117582_P02 3.21Zea mays7E-7811399100105 (82)_
v1_GRMZM2G117582_P02 4a53Zea mays7E-781139910081 (80)_
v1_GRMZM2G430600_P04 4a53Zea mays8E-781139910047 (47)_
Show all       

#Spots: The number of publicly accessible spots are in parenthesis
Prediction
PFAM: efhand(3) efhand_Ca_insen(1)
TargetP: Cytoplasm (Class 2 C0.119; M0.112; S0.129; _0.874)
Predotar:
Subcel. Location:
TM-HMM prediction: No
Aramemnon:
TAT position:
Length 113 aa (-cTP 92)
Molecular Weight 12.87 kDA(-cTP )
PI 4.19(-cTP )

Experimental Evidence

Expand

View Identified Peptides  

View GeneModel  
Expr*SpotMW nativeMW denaturedpI nativepI denaturedTypeMowseAmbiguityTissueSample fromGenotype
356Detail       leaf [A. thaliana] total leaf tissue 1.07 wild-type
361Detail       leaf [A. thaliana] total leaf tissue 1.07 wild-type
371Detail       leaf [A. thaliana] total leaf tissue clpr4-1
528Detail       leaf [A. thaliana] total leaf tissue wild-type (wt2)
1346Detail       leaf [A. thaliana] total tissue (5 day HL) wild-type (rep. 2)
1347Detail       leaf [A. thaliana] total tissue (5 day HL) wild-type (rep. 3)
1348Detail       leaf [A. thaliana] total tissue (5 day HL) abck2xabck3 (rep. 1)
1399Detail       leaf [A. thaliana] total leaf tissue 1.14 -rep. 1 clpp3-1
1400Detail       leaf [A. thaliana] total leaf tissue 1.14 -rep. 1 wild-type
1401Detail       leaf [A. thaliana] total leaf tissue 1.14 -rep. 1 clpp3-1
1404Detail       leaf [A. thaliana] total leaf tissue 1.14 -rep. 1 wild-type
1408Detail       leaf [A. thaliana] total leaf tissue 1.07 rep 2. clpr2-1
1414Detail       leaf [A. thaliana] total leaf tissue -114 rep1tR2 wild-type
1418Detail       leaf [A. thaliana] total tissue (2% sucrose) clpr4-1 (rep. 3)
1421Detail       leaf [A. thaliana] total leaf tissue wild-type (rep. 1)
1431Detail       leaf [A. thaliana] total tissue (2% sucrose) wild-type (rep. 2)
1432Detail       leaf [A. thaliana] total tissue (2% sucrose) wild-type (rep. 2)
1519Detail       leaf [A. thaliana] wild-type
1531Detail       leaf [A. thaliana] total leaf tissue - 40 uM CAP wild-type (rep. 1)
1533Detail       leaf [A. thaliana] total leaf tissue - 30 uM CAP clps (rep. 1)
1534Detail       leaf [A. thaliana] total leaf tissue - 40 uM CAP clps (rep. 1)
1545Detail       leaf [A. thaliana] TiO2 thylakoid membranewt
1566Detail       leaf [A. thaliana] TiO2 thylakoid membranek2k3
1569Detail       leaf [A. thaliana] TiO2 thylakoid membranek1k3
1572Detail       leaf [A. thaliana] TiO2 thylakoid membraneWT
1581Detail       leaf [A. thaliana] TiO2 thylakoid membraneK2K3
2003Detail       leaf [A. thaliana] over expressed M48 plastoglobuleM48
2005Detail       leaf [A. thaliana] RNAi PG plastoglobuleRNAi
2019Detail       leaf [A. thaliana] total leaf tissue opda1-2
2028Detail       leaf [A. thaliana] WT PG plastoglobuleWT
2029Detail       leaf [A. thaliana] over expressed M48 plastoglobuleM48
2030Detail       leaf [A. thaliana] over expressed M48 plastoglobuleM48
2182Detail       Rosettes [A. thaliana] total soluble tic40 and wt
2183Detail       Rosettes [A. thaliana] total soluble tic40 and wt
2184Detail       Rosettes [A. thaliana] total soluble tic40 and wt
2185Detail       Rosettes [A. thaliana] total soluble tic40 and wt
2192Detail        [A. thaliana] total soluble P3-trap-strepII 16
2248Detail       seedlings [A. thaliana] total tissue wild-type
2249Detail       seedlings [A. thaliana] total tissue gfs9
2251Detail       seedlings [A. thaliana] total tissue wild-type
2400Detail       leaf-soluble [A. thaliana] GFP-nano-trap wt/DUF760-1GFP/ClpC1TRAPSTREP

* For details about the exprimental sources click here.

Published Proteomics Data

 17317660(Plasma Membrane proteome)
17151019(vacuole - suspension cell)
17644812(plasma membrane - suspension cells)
18463617(suspension cells-phosphorylated proteins)
18814325(cotyledons)
20118269(developing seeds)
19036721(detergent resistant plasma membrane (DRM) proteins (Cell cultures))
19260003(detergent resistant plasma membrane (DRM) proteins (Cell cultures))
19525416(leaf (wt and clpr4-1 mutant))
20706207(contaminants cell cycle interactome (cell culture))
20516081(tagged-26S proteasome-affinity)
22060019(phosphoproteome - N-starved seedlings)
21988472(vacuole (unfiltered data))

Comparative Proteomics Data

©Klaas J. van Wijk Lab, Cornell University   Web Accessibility Help