PPDB

PPDB	The Plant Proteome Database

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AT2G26990.1 proteasome family protein

Lab Annot.

FUS12 (FUSCA 12), CSN2
Mapman: 30.11.1 signalling.light.COP9 signalosome

Curated Location

cytosol (Pubmed: 12615944 )

TAIR curated location: signalosome complex & nucleus11019806,10782111

Species

Arabidopsis thaliana Source: TAIR Arabidopsis (v.11)

Links

TAIR PeptideAtlas POGS SUBA Uniprot PTM Get sequence

Related Genes

Acc ver Species Evalue Matchlen %Iden %Similar #spots TargetP
AT1G29150.2 11 Arabidopsis thaliana 2E-14 176 25 51 0 (0) _
AT1G29150.1 11 Arabidopsis thaliana 2E-14 176 25 51 149 (78) _
Os01g17180.1 7 Oryza sativa 0 506 71 80 10 (10) _
Os01g17180.2 6 Oryza sativa 0 376 88 95 1 (1) _
Os04g36700.1 7 Oryza sativa 2E-14 312 23 45 58 (58) _
Zm00001eb332660_P002 agpv5 Zea mays 0 438 83 93 0 (0) _
Zm00001eb332660_P001 agpv5 Zea mays 0 413 81 92 0 (0) S
GRMZM2G132804_P02 3.21 Zea mays 0 357 83 92 7 (7) _
Show all

#Spots: The number of publicly accessible spots are in parenthesis

Prediction

PFAM:	PCI(1) TPR_7(4) TPR_8(2)
TargetP:	Cytoplasm (Class 2 C0.179; M0.094; S0.134; _0.902)
Predotar:
Subcel. Location:
TM-HMM prediction:	No
Aramemnon:
TAT position:
Length	439 aa (-cTP 435)
Molecular Weight	51.19 kDA(-cTP )
PI	5.44(-cTP )

Experimental Evidence

Expand

View Identified Peptides

View GeneModel

Expr*	Spot	MW native	MW denatured	pI native	pI denatured	Type	Mowse	Ambiguity	Tissue	Sample from	Genotype
324	Detail								leaf [A. thaliana]	cell wall enriched	wild-type
361	Detail								leaf [A. thaliana]	total leaf tissue 1.07	wild-type
527	Detail								leaf [A. thaliana]	total leaf tissue	wild-type (wt1)
621	Detail								leaf [A. thaliana]	total leaf tissue	clpr4-1
1400	Detail								leaf [A. thaliana]	total leaf tissue 1.14 -rep. 1	wild-type
1401	Detail								leaf [A. thaliana]	total leaf tissue 1.14 -rep. 1	clpp3-1
1403	Detail								leaf [A. thaliana]	total leaf tissue 1.14 -rep. 1	clpp3-1
1404	Detail								leaf [A. thaliana]	total leaf tissue 1.14 -rep. 1	wild-type
1405	Detail								leaf [A. thaliana]	total leaf tissue 1.07 rep 2.	wild-type
1407	Detail								leaf [A. thaliana]	total leaf tissue 1.07 rep 2.	clpr2-1
1423	Detail								leaf [A. thaliana]	total leaf tissue	wild-type (rep. 3)
1426	Detail								leaf [A. thaliana]	total leaf tissue	prep1xprep2xt1xt2 (rep. 3)
1766	Detail								leaf [A. thaliana]	Thylakoids thylakoid membrane	Met1-1
2286	Detail								[A. thaliana]		Clp C1 WT
2287	Detail								[A. thaliana]		Clp C1 WT
2297	Detail								[A. thaliana]		Clp C1 WT

* For details about the exprimental sources click here.

Published Proteomics Data

18463617(suspension cells-phosphorylated proteins)
19546170(mature pollen grains)
21166475(cytosolic-fractions-crude)
21166475(cytosol-enriched&curated)
21173025(root proteome)

Comparative Proteomics Data