PPDB

PPDB	The Plant Proteome Database

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AT2G26620.1 Pectin lyase-like superfamily protein

Lab Annot.

Mapman: 10.6.3 cell wall.degradation.pectate lyases and polygalacturonases

Curated Location

Species

Arabidopsis thaliana Source: TAIR Arabidopsis (v.11)

Links

TAIR PeptideAtlas POGS SUBA Uniprot PTM Get sequence

Related Genes

Acc ver Species Evalue Matchlen %Iden %Similar #spots TargetP
AT2G15470.1 11 Arabidopsis thaliana 0 404 92 95 0 (0) S
AT2G15450.1 11 Arabidopsis thaliana 0 404 91 94 0 (0) S
AT2G15460.1 11 Arabidopsis thaliana 0 400 92 95 0 (0) S
Os06g35320.1 7 Oryza sativa 3E-103 370 46 58 0 (0) S
Os06g35370.1 7 Oryza sativa 3E-103 370 46 58 0 (0) S
Os01g33300.1 7 Oryza sativa 6E-98 373 40 59 0 (0) S
GRMZM2G160526_P01 3.21 Zea mays 2E-107 412 42 57 14 (14) S
Zm00001eb275900_P001 agpv5 Zea mays 2E-107 412 42 57 0 (0) S
v1_GRMZM2G160526_P01 4a53 Zea mays 2E-107 412 42 57 13 (11) S
Show all

#Spots: The number of publicly accessible spots are in parenthesis

Prediction

PFAM:	Glyco_hydro_28(1) Pectate_lyase_3(1) Peptidase_M43(1) RRM_9(2)
TargetP:	Secreted (Class 1 C0.020; M0.058; S0.932; _0.007)
Predotar:
Subcel. Location:
TM-HMM prediction:	No
Aramemnon:
TAT position:
Length	402 aa (-cTP 383)
Molecular Weight	43.98 kDA(-cTP )
PI	8.87(-cTP )

Experimental Evidence

View GeneModel

* For details about the exprimental sources click here.

Published Proteomics Data

Comparative Proteomics Data