PPDB

 The Plant Proteome Database

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AT2G26280.1   CTC-interacting domain 7
Lab Annot. CTC-interacting domain 7
Mapman: 28.1 DNA.synthesis/chromatin structure
Curated Location
Species Arabidopsis thaliana     Source: TAIR Arabidopsis (v.11)
Links TAIR   PeptideAtlas   POGS   SUBA   Uniprot   PTM     Get sequence
Related Genes

AccverSpeciesEvalueMatchlen%Iden%Similar#spotsTargetP
AT2G26280.3 11Arabidopsis thaliana05671001000 (0)C
AT2G26280.2 11Arabidopsis thaliana04701001000 (0)C
AT2G26280.5 11Arabidopsis thaliana04701001000 (0)C
Os06g09890.4 7Oryza sativa1E-14455946622 (2)C
Os06g09890.1 7Oryza sativa1E-14455946622 (2)C
Os06g09890.2 7Oryza sativa1E-14455946622 (2)C
GRMZM2G392700_P01 3.21Zea mays1E-14055847600 (0)C
v1_GRMZM2G392700_P01 4a53Zea mays1E-14055847600 (0)C
Zm00001eb278590_P003 agpv5Zea mays1E-14055847600 (0)C
Show all       

#Spots: The number of publicly accessible spots are in parenthesis
Prediction
PFAM: DUF1771(1) PAM2(1) Smr(1)
TargetP: Chloroplast (Class 2 C0.933; M0.024; S0.019; _0.183)
Predotar:
Subcel. Location: Stroma
TM-HMM prediction: No
Aramemnon:
TAT position:
Length 567 aa (-cTP 500)
Molecular Weight 62.15 kDA(-cTP 55.23)
PI 5.96(-cTP 5.65)

Experimental Evidence

Expand

View Identified Peptides  

View GeneModel  
Expr*SpotMW nativeMW denaturedpI nativepI denaturedTypeMowseAmbiguityTissueSample fromGenotype
2286Detail        [A. thaliana] Clp C1 WT
2287Detail        [A. thaliana] Clp C1 WT
2296Detail        [A. thaliana] Clp C1 WT

* For details about the exprimental sources click here.

Published Proteomics Data

 19376835(leaf phosphoproteins)
21173025(root proteome)

Comparative Proteomics Data

©Klaas J. van Wijk Lab, Cornell University   Web Accessibility Help