PPDB

 The Plant Proteome Database

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AT2G26250.1   3-ketoacyl-CoA synthase 10
Lab Annot. beta-ketoacyl-CoA synthase family (FIDDLEHEAD) (FDH), identical to GB:AJ010713 (fiddlehead protein)
Mapman: 11.1.10 lipid metabolism.FA synthesis and FA elongation.beta ketoacyl CoA synthase
Curated Location
Species Arabidopsis thaliana     Source: TAIR Arabidopsis (v.11)
Links TAIR   PeptideAtlas   POGS   SUBA   Uniprot   PTM     Get sequence
Related Genes

AccverSpeciesEvalueMatchlen%Iden%Similar#spotsTargetP
AT1G19440.1 11Arabidopsis thaliana052256720 (0)_
AT2G16280.1 11Arabidopsis thaliana051854730 (0)_
AT2G26640.1 11Arabidopsis thaliana051554710 (0)_
Os03g08360.1 7Oryza sativa0548697947 (47)_
Os05g49900.1 7Oryza sativa053454690 (0)_
Os05g49290.2 7Oryza sativa051858720 (0)_
v1_GRMZM2G445602_P01 4a53Zea mays0546708051 (51)_
Zm00001eb006020_P001 agpv5Zea mays054670800 (0)_
GRMZM2G445602_P01 3.21Zea mays0546708058 (56)_
Show all       

#Spots: The number of publicly accessible spots are in parenthesis
Prediction
PFAM: ACP_syn_III(1) ACP_syn_III_C(2) Chal_sti_synt_C(1) Chal_sti_synt_N(1) FAE1_CUT1_
TargetP: Cytoplasm (Class 3 C0.342; M0.036; S0.018; _0.838)
Predotar:
Subcel. Location:
TM-HMM prediction: 3 TMs
Aramemnon: 3 TMs
TAT position:
Length 550 aa (-cTP 540)
Molecular Weight 61.96 kDA(-cTP )
PI 9.14(-cTP )

Experimental Evidence

Expand

View Identified Peptides  

View GeneModel  
Expr*SpotMW nativeMW denaturedpI nativepI denaturedTypeMowseAmbiguityTissueSample fromGenotype
351Detail       leaf [A. thaliana] total leaf tissue 1.07 wild-type
352Detail       leaf [A. thaliana] total leaf tissue 1.07 wild-type
1394Detail       leaf [A. thaliana] total leaf tissue wild-type (rep. 1)
1400Detail       leaf [A. thaliana] total leaf tissue 1.14 -rep. 1 wild-type
1403Detail       leaf [A. thaliana] total leaf tissue 1.14 -rep. 1 clpp3-1
1404Detail       leaf [A. thaliana] total leaf tissue 1.14 -rep. 1 wild-type
1407Detail       leaf [A. thaliana] total leaf tissue 1.07 rep 2. clpr2-1
1409Detail       leaf [A. thaliana] total leaf tissue 1.07 rep 1.1 wild-type
1410Detail       leaf [A. thaliana] total leaf tissue 1.07 rep 1.2 wild-type
1418Detail       leaf [A. thaliana] total tissue (2% sucrose) clpr4-1 (rep. 3)
1421Detail       leaf [A. thaliana] total leaf tissue wild-type (rep. 1)
1453Detail       leaf [A. thaliana] chloroplast nucleoidwild-type (rep. 1)
1529Detail       leaf [A. thaliana] total leaf tissue - 0 uM CAP wild-type (rep. 1)
1530Detail       leaf [A. thaliana] total leaf tissue - 30 uM CAP wild-type (rep. 1)
1533Detail       leaf [A. thaliana] total leaf tissue - 30 uM CAP clps (rep. 1)
1628Detail       Rosettes [A. thaliana] total leaf tissue thylakoid + envelopek1xk3
1749Detail       leaf [A. thaliana] total leaf tissue DXS_Flag
1756Detail       leaf [A. thaliana] total leaf tissue Col_0
1758Detail       leaf [A. thaliana] total leaf tissue DXS_Flag+fosmidomycin
1930Detail       leaf [A. thaliana] total leaf tissue Col_0 Wild-type
1931Detail       leaf [A. thaliana] total leaf tissue DXS_Flag
1932Detail       leaf [A. thaliana] total leaf tissue DXS_Flag
2009Detail       leaf [A. thaliana] total leaf tissue wild-type
2011Detail       leaf [A. thaliana] total leaf tissue opda1-2
2015Detail       leaf [A. thaliana] total leaf tissue opda1-2
2019Detail       leaf [A. thaliana] total leaf tissue opda1-2
2238Detail       seedlings [A. thaliana] total tissue gfs9
2248Detail       seedlings [A. thaliana] total tissue wild-type
2250Detail       seedlings [A. thaliana] total tissue atg5
2251Detail       seedlings [A. thaliana] total tissue wild-type
2252Detail       seedlings [A. thaliana] total tissue gfs9
2253Detail       seedlings [A. thaliana] total tissue atg5
2270Detail       seedlings [A. thaliana] total tissue wild-type

* For details about the exprimental sources click here.

Published Proteomics Data

 16618929(ER-LOPIT-callus)
17432890(leaf total membranes)
19525416(leaf (wt and clpr4-1 mutant))
19334764(plasma membrane (cell culture))
20166762(guard cells (Arabidopsis))
19114538(guard cells Arabidopsis leaf)

Comparative Proteomics Data

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