PPDB

The Plant Proteome Database

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AT2G26240.1   Transmembrane proteins 14C

Lab Annot. Transmembrane protein
Mapman: 35.2 not assigned.unknown
Curated Location
Species Arabidopsis thaliana     Source: TAIR Arabidopsis (v.11)
Links TAIR   PeptideAtlas   POGS   SUBA   Uniprot   PTM     Get sequence
Related Genes

AccverSpeciesEvalueMatchlen%Iden%Similar#spotsTargetP
AT3G43520.1 11Arabidopsis thaliana2E-371045983229 (221)C
AT1G50740.1 11Arabidopsis thaliana2E-1310041600 (0)S
AT3G20510.1 11Arabidopsis thaliana2E-1110041582 (2)_
Os04g55930.1 7Oryza sativa2E-29105608015 (15)C
Os03g38790.1 7Oryza sativa1E-0710337570 (0)_
v1_GRMZM2G386525_P01 4a53Zea mays6E-30105628029 (28)C
Zm00001eb068040_P001 agpv5Zea mays6E-3010562800 (0)C
GRMZM2G386525_P01 3.21Zea mays6E-30105628015 (15)C
Show all       

#Spots: The number of publicly accessible spots are in parenthesis

Prediction
PFAM: Tmemb_14(1)
TargetP: Secreted (Class 5 C0.002; M0.500; S0.593; _0.369)
Predotar:
Subcel. Location:
TM-HMM prediction: 3 TMs
Aramemnon: 4 TMs
TAT position:
Length 108 aa (-cTP 23)
Molecular Weight 11.11 kDA(-cTP )
PI 10.07(-cTP )

Experimental Evidence

Expand

View Identified Peptides  

View GeneModel  

Expr*SpotMW nativeMW denaturedpI nativepI denaturedTypeMowseAmbiguityTissueSample fromGenotype
324Detail       leaf [A. thaliana] cell wall enriched wild-type
1396Detail       leaf [A. thaliana] total leaf tissue clpt1xclpt2 (rep. 2)
1399Detail       leaf [A. thaliana] total leaf tissue 1.14 -rep. 1 clpp3-1
1401Detail       leaf [A. thaliana] total leaf tissue 1.14 -rep. 1 clpp3-1
1402Detail       leaf [A. thaliana] total leaf tissue 1.14 -rep. 1 wild-type
1403Detail       leaf [A. thaliana] total leaf tissue 1.14 -rep. 1 clpp3-1

* For details about the exprimental sources click here.

Published Proteomics Data

15276431(Mitochondrial proteome)
15276431(mitochondrial membranes-suspension cells)
21311031(mitochondria)
21472856(mitochondrial-reference-proteome-Millar-Nov2011)

Comparative Proteomics Data


©Klaas J. van Wijk Lab, Cornell University   Web Accessibility Help