PPDB

PPDB	The Plant Proteome Database

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AT2G26140.1 FTSH protease 4

Lab Annot.

FtsH4 (iAAA)
Mapman: 29.5.7.2.4* protein.degradation.metalloprotease.MA(M).M41

Curated Location

mitochondria (Pubmed: 16247555 )

TAIR curated location: mitochondrion14630971

Species

Arabidopsis thaliana Source: TAIR Arabidopsis (v.11)

Links

TAIR PeptideAtlas POGS SUBA Uniprot PTM Get sequence

Related Genes

Acc ver Species Evalue Matchlen %Iden %Similar #spots TargetP
AT5G53170.1 11 Arabidopsis thaliana 0 600 53 71 61 (53) C
AT1G50250.1 11 Arabidopsis thaliana 2E-137 455 47 67 549 (509) C
AT5G42270.1 11 Arabidopsis thaliana 2E-136 455 48 67 986 (900) C
Os01g39260.1 7 Oryza sativa 0 689 75 86 2 (2) M
Os01g39250.1 7 Oryza sativa 0 669 75 86 0 (0) M
Os01g43150.1 7 Oryza sativa 0 631 50 67 11 (11) C
Zm00001eb357200_P003 agpv5 Zea mays 0 687 74 86 0 (0) M
GRMZM2G096764_P01 3.21 Zea mays 0 667 75 87 9 (9) M
Zm00001eb357200_P004 agpv5 Zea mays 0 667 75 87 0 (0) M
Show all

#Spots: The number of publicly accessible spots are in parenthesis

Prediction

PFAM:	AAA(1) AAA_16(3) AAA_17(1) AAA_18(1) AAA_2(1) AAA_22(2) AAA_24(1) AAA_25(1) AAA_
TargetP:	Mitochondria (Class 3 C0.276; M0.697; S0.005; _0.069)
Predotar:
Subcel. Location:
TM-HMM prediction:	No
Aramemnon:	2 TMs
TAT position:
Length	717 aa (-cTP 652)
Molecular Weight	77.27 kDA(-cTP )
PI	8.73(-cTP )

Experimental Evidence

Expand

View Identified Peptides

View GeneModel

Expr*	Spot	MW native	MW denatured	pI native	pI denatured	Type	Mowse	Ambiguity	Tissue	Sample from	Genotype
1417	Detail								leaf [A. thaliana]	total tissue (2% sucrose)	clpr4-1 (rep. 2)
1758	Detail								leaf [A. thaliana]	total leaf tissue	DXS_Flag+fosmidomycin
1829	Detail								leaf [A. thaliana]	Thylakoids thylakoid membrane	Met1-1 Fluctuating light
2010	Detail								leaf [A. thaliana]	total leaf tissue	prep1-1xprep2-1
2015	Detail								leaf [A. thaliana]	total leaf tissue	opda1-2
2273	Detail								seedlings [A. thaliana]	total tissue	wild-type
2275	Detail								seedlings [A. thaliana]	total tissue	wild-type
2320	Detail								[A. thaliana]	Thylakoids plastoglobule
2321	Detail								leaf [A. thaliana]
2324	Detail								leaf [A. thaliana]	THYLAKOIDS thylakoid membrane
2325	Detail								leaf [A. thaliana]	thylakoids thylakoid membrane	abc1k6

* For details about the exprimental sources click here.

Published Proteomics Data

16618929(MITO/PLASTID-LOPIT-callus)
17432890(leaf total membranes)
19200160(flower-stage 12)
19546170(mature pollen grains)
19525416(leaf (wt and clpr4-1 mutant))
19334764(plasma membrane (cell culture))
21166475(cytosolic-fractions-crude)
21173025(root proteome)
21433285(Crude microsomes cell_cultures)
21433285(purified Plasma membrane -cell_cultures)

Comparative Proteomics Data