PPDB

PPDB	The Plant Proteome Database

Search PPDB by:

PPDB home page

AT2G26135.1 RING/U-box protein with C6HC-type zinc finger

Lab Annot.

Mapman: 27.3.99 RNA.regulation of transcription.unclassified

Curated Location

Species

Arabidopsis thaliana Source: TAIR Arabidopsis (v.11)

Links

TAIR PeptideAtlas POGS SUBA Uniprot PTM Get sequence

Related Genes

Acc ver Species Evalue Matchlen %Iden %Similar #spots TargetP
AT2G26130.1 11 Arabidopsis thaliana 1E-153 368 60 71 0 (0) _
AT3G45580.1 11 Arabidopsis thaliana 7E-131 398 51 65 0 (0) _
AT3G43750.1 11 Arabidopsis thaliana 2E-116 332 52 66 0 (0) S
Os08g35060.1 7 Oryza sativa 2E-34 197 35 50 0 (0) _
Os11g01240.1 7 Oryza sativa 9E-33 353 27 43 0 (0) S
Os09g11170.1 7 Oryza sativa 1E-31 200 33 45 0 (0) _
Zm00001eb194870_P002 agpv5 Zea mays 7E-63 362 33 51 0 (0) S
GRMZM2G020996_P01 3.21 Zea mays 7E-63 362 33 51 0 (0) S
v1_GRMZM2G020996_P01 4a53 Zea mays 7E-63 362 33 51 0 (0) S
Show all

#Spots: The number of publicly accessible spots are in parenthesis

Prediction

PFAM:	IBR(4) RVT_3(1) zf-C3HC4(3) zf-C3HC4_2(3) zf-RING_2(3) zf-RING_5(2) zf-RING_UBOX
TargetP:	Cytoplasm (Class 2 C0.063; M0.117; S0.073; _0.879)
Predotar:
Subcel. Location:
TM-HMM prediction:	1 TMs
Aramemnon:
TAT position:
Length	384 aa (-cTP 326)
Molecular Weight	43.27 kDA(-cTP )
PI	7.40(-cTP )

Experimental Evidence

View GeneModel

* For details about the exprimental sources click here.

Published Proteomics Data

Comparative Proteomics Data