PPDB

The Plant Proteome Database

Search PPDB by:

HyperLink
HyperLink
HyperLink
HyperLink
HyperLink
HyperLink
HyperLink
HyperLink
HyperLink HyperLink HyperLink

 

PPDB home page

AT2G25930.1   hydroxyproline-rich glycoprotein family protein

Lab Annot. hydroxyproline-rich glycoprotein protein
Mapman: 27.3.47 RNA.regulation of transcription.ELF3
Curated Location
TAIR curated location: nucleus11402161
Species Arabidopsis thaliana     Source: TAIR Arabidopsis (v.11)
Links TAIR   PeptideAtlas   POGS   SUBA   Uniprot   PTM     Get sequence
Related Genes

AccverSpeciesEvalueMatchlen%Iden%Similar#spotsTargetP
AT3G21320.1 11Arabidopsis thaliana4E-2539629420 (0)_
Os06g05060.1 7Oryza sativa3E-6480332450 (0)_
Os01g38530.1 7Oryza sativa1E-5779230440 (0)_
Os01g38530.2 7Oryza sativa2E-1619131500 (0)_
Zm00001eb159890_P001 agpv5Zea mays2E-4344434490 (0)_
GRMZM2G045275_P01 3.21Zea mays2E-4344434491 (1)_
v1_GRMZM2G045275_P01 4a53Zea mays2E-4344434490 (0)_
Show all       

#Spots: The number of publicly accessible spots are in parenthesis

Prediction
PFAM: 4_1_CTD(1) UBN_AB(1)
TargetP: Cytoplasm (Class 2 C0.161; M0.061; S0.008; _0.884)
Predotar:
Subcel. Location:
TM-HMM prediction: No
Aramemnon:
TAT position:
Length 695 aa (-cTP 606)
Molecular Weight 77.21 kDA(-cTP )
PI 8.63(-cTP )

Experimental Evidence

 

View GeneModel  

* For details about the exprimental sources click here.

Published Proteomics Data

20813957(SUMO proteome)

Comparative Proteomics Data


©Klaas J. van Wijk Lab, Cornell University   Web Accessibility Help