PPDB

The Plant Proteome Database

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AT2G25820.1   Integrase-type DNA-binding superfamily protein

Lab Annot.
Mapman: 27.3.3 RNA.regulation of transcription.AP2/EREBP, APETALA2/Ethylene-responsive element binding protein family
Curated Location
Species Arabidopsis thaliana     Source: TAIR Arabidopsis (v.11)
Links TAIR   PeptideAtlas   POGS   SUBA   Uniprot   PTM     Get sequence
Related Genes

AccverSpeciesEvalueMatchlen%Iden%Similar#spotsTargetP
AT4G32800.1 11Arabidopsis thaliana2E-6220255710 (0)_
AT5G11590.1 11Arabidopsis thaliana4E-5222147601 (1)_
AT5G25810.1 11Arabidopsis thaliana3E-429972820 (0)_
Os01g10370.1 7Oryza sativa2E-3911065760 (0)C
Os02g43970.1 7Oryza sativa5E-3910468750 (0)C
Os04g46440.1 7Oryza sativa8E-389067770 (0)C
Zm00001eb249470_P001 agpv5Zea mays5E-388770820 (0)C
Zm00001eb186490_P001 agpv5Zea mays2E-378970820 (0)C
v1_GRMZM2G072926_P01 4a53Zea mays2E-378970820 (0)C
Show all       

#Spots: The number of publicly accessible spots are in parenthesis

Prediction
PFAM: AP2(1) RAP1(1) SR-25(2)
TargetP: Cytoplasm (Class 2 C0.169; M0.126; S0.017; _0.898)
Predotar:
Subcel. Location:
TM-HMM prediction: No
Aramemnon:
TAT position:
Length 225 aa (-cTP 213)
Molecular Weight 24.86 kDA(-cTP )
PI 5.05(-cTP )

Experimental Evidence

 

View GeneModel  

* For details about the exprimental sources click here.

Published Proteomics Data

Comparative Proteomics Data


©Klaas J. van Wijk Lab, Cornell University   Web Accessibility Help