PPDB

 The Plant Proteome Database

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AT2G25640.1   SPOC domain / Transcription elongation factor S-II protein
Lab Annot.
Mapman: 27.3.67 RNA.regulation of transcription.putative transcription regulator
Curated Location
Species Arabidopsis thaliana     Source: TAIR Arabidopsis (v.11)
Links TAIR   PeptideAtlas   POGS   SUBA   Uniprot   PTM     Get sequence
Related Genes

AccverSpeciesEvalueMatchlen%Iden%Similar#spotsTargetP
AT2G25640.2 11Arabidopsis thaliana066399990 (0)_
AT5G11430.1 11Arabidopsis thaliana6E-15968944610 (0)_
AT5G11430.3 11Arabidopsis thaliana6E-15968944610 (0)_
Os02g11780.1 7Oryza sativa3E-10976336530 (0)_
Os06g39480.1 7Oryza sativa6E-7342839550 (0)_
Os04g55190.1 7Oryza sativa6E-2515239550 (0)C
Zm00001eb205470_P001 agpv5Zea mays3E-11371339530 (0)_
GRMZM2G022987_P01 3.21Zea mays3E-11371339530 (0)_
v1_GRMZM2G022987_P01 4a53Zea mays3E-11371339530 (0)_
Show all       

#Spots: The number of publicly accessible spots are in parenthesis
Prediction
PFAM: SPOC(1) TFIIS_M(2)
TargetP: Cytoplasm (Class 4 C0.365; M0.072; S0.027; _0.577)
Predotar:
Subcel. Location:
TM-HMM prediction: No
Aramemnon:
TAT position:
Length 745 aa (-cTP 735)
Molecular Weight 81.20 kDA(-cTP )
PI 5.26(-cTP )

Experimental Evidence

 

View GeneModel  

* For details about the exprimental sources click here.

Published Proteomics Data

Comparative Proteomics Data

©Klaas J. van Wijk Lab, Cornell University   Web Accessibility Help