PPDB

The Plant Proteome Database

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AT2G25605.1   DNA-directed RNA polymerase subunit beta

Lab Annot. unknown protein
Mapman: 35.2 not assigned.unknown
Curated Location
Species Arabidopsis thaliana     Source: TAIR Arabidopsis (v.11)
Links TAIR   PeptideAtlas   POGS   SUBA   Uniprot   PTM     Get sequence
Related Genes

AccverSpeciesEvalueMatchlen%Iden%Similar#spotsTargetP
Os05g49910.1 7Oryza sativa1E-9716977910 (0)C
Os05g49910.3 7Oryza sativa6E-6411480920 (0)C
Os05g49910.2 7Oryza sativa3E-306475900 (0)C
GRMZM2G075651_P01 3.21Zea mays2E-10016679953 (0)C
Zm00001eb344390_P001 agpv5Zea mays2E-10016679950 (0)C
v1_GRMZM2G075651_P01 4a53Zea mays2E-10016679950 (0)C
Show all       

#Spots: The number of publicly accessible spots are in parenthesis

Prediction
PFAM:
TargetP: Chloroplast (Class 2 C0.895; M0.073; S0.087; _0.098)
Predotar:
Subcel. Location: Stroma
TM-HMM prediction: No
Aramemnon:
TAT position:
Length 200 aa (-cTP 166)
Molecular Weight 23.45 kDA(-cTP 19.75)
PI 6.38(-cTP 5.51)

Experimental Evidence

Expand

View Identified Peptides  

View GeneModel  

Expr*SpotMW nativeMW denaturedpI nativepI denaturedTypeMowseAmbiguityTissueSample fromGenotype
544Detail       leaf [A. thaliana] stroma (FPLC) <600 kDa (LMA) wild-type
1407Detail       leaf [A. thaliana] total leaf tissue 1.07 rep 2. clpr2-1
1458Detail       leaf [A. thaliana] chloroplast stromaclps (rep. 1)
1461Detail       leaf [A. thaliana] chloroplast stromaclpc1 (rep. 1)
1462Detail       leaf [A. thaliana] chloroplast stromaclpc1 (rep. 2)
1463Detail       leaf [A. thaliana] chloroplast stromaclpc1 (rep. 3)
1486Detail       leaf [A. thaliana] chloroplast stromaclpc1 x clps (rep. 3)
1948Detail       leaf [A. thaliana] stroma ClpS stromaclpS
1949Detail       leaf [A. thaliana] stroma ClpS stromaclpS

* For details about the exprimental sources click here.

Published Proteomics Data

Comparative Proteomics Data


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