PPDB

The Plant Proteome Database

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AT2G25600.1   Shaker pollen inward K+ channel

Lab Annot. SPIK (SHAKER POLLEN INWARD K+ CHANNEL); cyclic nucleotide binding / inward rectifier potassium channel/ potassium channel
Mapman: 34.15 transport.potassium
Curated Location
Species Arabidopsis thaliana     Source: TAIR Arabidopsis (v.11)
Links TAIR   PeptideAtlas   POGS   SUBA   Uniprot   PTM     Get sequence
Related Genes

AccverSpeciesEvalueMatchlen%Iden%Similar#spotsTargetP
AT4G32500.1 11Arabidopsis thaliana088677850 (0)_
AT2G26650.1 11Arabidopsis thaliana087358732 (2)C
AT2G26650.2 11Arabidopsis thaliana076558730 (0)_
Os01g45990.1 7Oryza sativa087156730 (0)M
Os07g07910.1 7Oryza sativa086949660 (0)C
Os01g55200.1 7Oryza sativa046857740 (0)_
Zm00001eb359320_P001 agpv5Zea mays087957730 (0)M
GRMZM2G171279_P01 3.21Zea mays087957730 (0)M
v1_GRMZM2G171279_P01 4a53Zea mays087957730 (0)M
Show all       

#Spots: The number of publicly accessible spots are in parenthesis

Prediction
PFAM: Ank(3) Ank_2(2) Ank_3(5) Ank_4(4) Ank_5(3) cNMP_binding(1) Ion_trans(1) Ion_tran
TargetP: Cytoplasm (Class 2 C0.092; M0.064; S0.124; _0.923)
Predotar:
Subcel. Location:
TM-HMM prediction: 5 TMs
Aramemnon: 4 TMs
TAT position:
Length 888 aa (-cTP 831)
Molecular Weight 99.21 kDA(-cTP )
PI 6.32(-cTP )

Experimental Evidence

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View Identified Peptides  

View GeneModel  

Expr*SpotMW nativeMW denaturedpI nativepI denaturedTypeMowseAmbiguityTissueSample fromGenotype
1393Detail       leaf [A. thaliana] total leaf tissue wild-type (rep. 2)

* For details about the exprimental sources click here.

Published Proteomics Data

19546170(mature pollen grains)
20733066(phosphoproteome-ABA-leaf)

Comparative Proteomics Data


©Klaas J. van Wijk Lab, Cornell University   Web Accessibility Help