PPDB

 The Plant Proteome Database

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AT2G25580.1   Tetratricopeptide repeat (TPR)-like superfamily protein
Lab Annot. MEF8 (mitochondrial editing factor 8)
Mapman: 27 RNA; 27.1.5* RNA.processing.editing
Curated Location
Species Arabidopsis thaliana     Source: TAIR Arabidopsis (v.11)
Links TAIR   PeptideAtlas   POGS   SUBA   Uniprot   PTM     Get sequence
Related Genes

AccverSpeciesEvalueMatchlen%Iden%Similar#spotsTargetP
AT2G25580.2 11Arabidopsis thaliana06151001000 (0)M
AT4G32450.1 11Arabidopsis thaliana7E-16439357750 (0)M
AT2G34370.1 11Arabidopsis thaliana3E-13440749680 (0)M
Os01g53610.1 7Oryza sativa2E-13939748690 (0)M
Os04g09530.1 7Oryza sativa4E-8032441619 (9)_
Os04g09530.2 7Oryza sativa4E-8032441614 (4)_
v1_GRMZM2G158645_P01 4a53Zea mays4E-13739348670 (0)M
GRMZM2G158645_P01 3.21Zea mays4E-13739348670 (0)M
Zm00001eb153890_P001 agpv5Zea mays4E-13739348670 (0)M
Show all       

#Spots: The number of publicly accessible spots are in parenthesis
Prediction
PFAM: DYW_deaminase(1) PPR(6) PPR_1(5) PPR_2(5) PPR_3(3)
TargetP: Mitochondria (Class 4 C0.112; M0.439; S0.108; _0.072)
Predotar:
Subcel. Location:
TM-HMM prediction: No
Aramemnon:
TAT position:
Length 615 aa (-cTP 582)
Molecular Weight 69.91 kDA(-cTP )
PI 5.55(-cTP )

Experimental Evidence

 

View GeneModel  

* For details about the exprimental sources click here.

Published Proteomics Data

Comparative Proteomics Data

©Klaas J. van Wijk Lab, Cornell University   Web Accessibility Help