PPDB

The Plant Proteome Database

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AT2G25320.1   TRAF-like family protein

Lab Annot.
Mapman: 35.1 not assigned.no ontology
Curated Location
Species Arabidopsis thaliana     Source: TAIR Arabidopsis (v.11)
Links TAIR   PeptideAtlas   POGS   SUBA   PTM     Get sequence
Related Genes

AccverSpeciesEvalueMatchlen%Iden%Similar#spotsTargetP
AT2G25320.3 11Arabidopsis thaliana016731001000 (0)C
AT2G25320.2 11Arabidopsis thaliana014021001000 (0)C
AT2G25330.1 11Arabidopsis thaliana072380860 (0)C
Os02g39990.1 7Oryza sativa6E-11029161790 (0)_
Os12g30540.1 7Oryza sativa1E-15121335928 (28)_
Os12g40520.1 7Oryza sativa7E-1515433560 (0)_
GRMZM2G041842_P01 3.21Zea mays085948660 (0)_
v1_GRMZM2G041842_P01 4a53Zea mays085948660 (0)_
Zm00001eb184600_P001 agpv5Zea mays0166855700 (0)_
Show all       

#Spots: The number of publicly accessible spots are in parenthesis

Prediction
PFAM: CALCOCO1(1) ERM(2) MATH(4) UPF0242(2) VHS(2)
TargetP: Chloroplast (Class 1 C0.948; M0.032; S0.090; _0.131)
Predotar:
Subcel. Location: Stroma
TM-HMM prediction: No
Aramemnon:
TAT position:
Length 1673 aa (-cTP 1647)
Molecular Weight 187.67 kDA(-cTP 185.15)
PI 5.47(-cTP 5.47)

Experimental Evidence

 

View GeneModel  

* For details about the exprimental sources click here.

Published Proteomics Data

21533090(plasmodesmata-crude)

Comparative Proteomics Data


©Klaas J. van Wijk Lab, Cornell University   Web Accessibility Help