PPDB

PPDB	The Plant Proteome Database

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AT2G25270.1 transmembrane protein

Lab Annot.

unknown protein
Mapman: 35.2 not assigned.unknown

Curated Location

plasma membrane

Species

Arabidopsis thaliana Source: TAIR Arabidopsis (v.11)

Links

TAIR PeptideAtlas POGS SUBA PTM Get sequence

Related Genes

Acc ver Species Evalue Matchlen %Iden %Similar #spots TargetP
AT2G12400.1 11 Arabidopsis thaliana 0 462 56 75 0 (0) S
AT1G80540.3 11 Arabidopsis thaliana 2E-134 491 42 61 0 (0) M
AT1G80540.1 11 Arabidopsis thaliana 9E-134 491 42 61 0 (0) M
Os02g55590.1 7 Oryza sativa 0 530 51 69 12 (12) S
Os02g55590.2 7 Oryza sativa 6E-160 405 53 74 5 (5) M
Os04g55110.1 7 Oryza sativa 8E-158 459 47 68 0 (0) S
v1_GRMZM2G180422_P01 4a53 Zea mays 0 516 53 70 1 (1) S
Zm00001eb258050_P003 agpv5 Zea mays 0 516 53 70 0 (0) S
GRMZM2G180422_P01 3.21 Zea mays 0 516 53 70 3 (3) S
Show all

#Spots: The number of publicly accessible spots are in parenthesis

Prediction

PFAM:	Cytomega_TRL10(2) DUF1461(2) DUF2730(1) DUF3671(2) DUF4381(2) FA_desaturase(3) P
TargetP:	Secreted (Class 5 C0.481; M0.029; S0.524; _0.033)
Predotar:
Subcel. Location:
TM-HMM prediction:	5 TMs
Aramemnon:	5 TMs
TAT position:
Length	545 aa (-cTP 511)
Molecular Weight	59.91 kDA(-cTP )
PI	6.18(-cTP )

Experimental Evidence

View GeneModel

* For details about the exprimental sources click here.

Published Proteomics Data

17317660(Plasma Membrane proteome)
17644812(plasma membrane - suspension cells)
18463617(suspension cells-phosphorylated proteins)
19036721(detergent resistant plasma membrane (DRM) proteins (Cell cultures))
21533090(plasmodesmata-crude)
21433285(Crude microsomes cell_cultures)
21433285(purified Plasma membrane -cell_cultures)

Comparative Proteomics Data