PPDB

The Plant Proteome Database

Search PPDB by:

HyperLink
HyperLink
HyperLink
HyperLink
HyperLink
HyperLink
HyperLink
HyperLink
HyperLink HyperLink HyperLink

 

PPDB home page

AT2G25200.1   hypothetical protein (DUF868)

Lab Annot. Plant protein of unknown function (DUF863)
Mapman: 35.2 not assigned.unknown
Curated Location
Species Arabidopsis thaliana     Source: TAIR Arabidopsis (v.11)
Links TAIR   PeptideAtlas   POGS   SUBA   Uniprot   PTM     Get sequence
Related Genes

AccverSpeciesEvalueMatchlen%Iden%Similar#spotsTargetP
AT5G11000.1 11Arabidopsis thaliana1E-6330841560 (0)C
AT5G28150.1 11Arabidopsis thaliana1E-3424333543 (3)C
AT3G04860.1 11Arabidopsis thaliana4E-3022230533 (3)C
Os03g59200.1 7Oryza sativa7E-3122732510 (0)C
Os05g01790.1 7Oryza sativa2E-3029528470 (0)_
Os07g38460.1 7Oryza sativa5E-2918534550 (0)C
GRMZM2G009901_P01 3.21Zea mays5E-3422832530 (0)C
Zm00001eb061550_P001 agpv5Zea mays5E-3422832530 (0)C
v1_GRMZM2G009901_P01 4a53Zea mays5E-3422832530 (0)C
Show all       

#Spots: The number of publicly accessible spots are in parenthesis

Prediction
PFAM: DUF868(1)
TargetP: Chloroplast (Class 5 C0.515; M0.049; S0.032; _0.330)
Predotar:
Subcel. Location: Stroma
TM-HMM prediction: No
Aramemnon:
TAT position:
Length 354 aa (-cTP 333)
Molecular Weight 40.35 kDA(-cTP 38.27)
PI 9.63(-cTP 9.58)

Experimental Evidence

 

View GeneModel  

* For details about the exprimental sources click here.

Published Proteomics Data

19036721(sterol dependent detergent resistant plasma membrane (DRM) proteins (Cell cultures))

Comparative Proteomics Data


©Klaas J. van Wijk Lab, Cornell University   Web Accessibility Help