PPDB

PPDB	The Plant Proteome Database

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AT2G25170.1 chromatin remodeling factor CHD3 (PICKLE)

Lab Annot.

chromatin remodeling factor CHD3 (PICKLE)
Mapman: 28.99 DNA.unspecified

Curated Location

TAIR curated location: nucleus16359393

Species

Arabidopsis thaliana Source: TAIR Arabidopsis (v.11)

Links

TAIR PeptideAtlas POGS SUBA Uniprot PTM Get sequence

Related Genes

Acc ver Species Evalue Matchlen %Iden %Similar #spots TargetP
AT2G25170.2 11 Arabidopsis thaliana 0 1384 100 100 0 (0) M
AT2G25170.4 11 Arabidopsis thaliana 0 1384 100 100 0 (0) _
AT2G25170.3 11 Arabidopsis thaliana 0 1384 100 100 0 (0) S
Os06g08480.1 7 Oryza sativa 0 1256 56 72 22 (22) _
Os07g31450.1 7 Oryza sativa 2E-180 839 41 59 0 (0) M
Os01g65850.1 7 Oryza sativa 3E-147 826 36 54 0 (0) M
GRMZM2G316191_P01 3.21 Zea mays 1E-179 840 41 58 0 (0) M
v1_GRMZM2G316191_P01 4a53 Zea mays 1E-179 840 41 58 1 (1) M
GRMZM2G316191_P02 3.21 Zea mays 2E-178 845 40 58 0 (0) C
Show all

#Spots: The number of publicly accessible spots are in parenthesis

Prediction

PFAM:	C1_1(1) C1_2(1) CHDCT2(1) Chromo(2) DUF1086(1) DUF1087(1) HDA2-3(1) Helicase_C(1
TargetP:	Cytoplasm (Class 4 C0.013; M0.518; S0.028; _0.862)
Predotar:
Subcel. Location:
TM-HMM prediction:	No
Aramemnon:
TAT position:
Length	1384 aa (-cTP 1373)
Molecular Weight	158.40 kDA(-cTP )
PI	5.43(-cTP )

Experimental Evidence

Expand

View Identified Peptides

View GeneModel

Expr*	Spot	MW native	MW denatured	pI native	pI denatured	Type	Mowse	Ambiguity	Tissue	Sample from	Genotype
874	Detail								leaf [A. thaliana]	chloroplast stroma	wild-type
1534	Detail								leaf [A. thaliana]	total leaf tissue - 40 uM CAP	clps (rep. 1)

* For details about the exprimental sources click here.

Published Proteomics Data

18463617(suspension cells-phosphorylated proteins)
19245862(nuclear phosphoproteins (seedlings & cell culture))
19376835(leaf phosphoproteins)
19114538(guard cells Arabidopsis leaf)
20733066(phosphoproteome-ABA-leaf)
20813957(SUMO proteome)
21768351(Leaf-Phosphoproteome)

Comparative Proteomics Data