PPDB

The Plant Proteome Database

Search PPDB by:

HyperLink
HyperLink
HyperLink
HyperLink
HyperLink
HyperLink
HyperLink
HyperLink
HyperLink HyperLink HyperLink

 

PPDB home page

AT2G24350.1   RNA binding (RRM/RBD/RNP motifs) family protein

Lab Annot.
Mapman: 27.1 RNA.processing
Curated Location
Species Arabidopsis thaliana     Source: TAIR Arabidopsis (v.11)
Links TAIR   PeptideAtlas   POGS   SUBA   PTM     Get sequence
Related Genes

AccverSpeciesEvalueMatchlen%Iden%Similar#spotsTargetP
AT2G24350.2 11Arabidopsis thaliana04081001000 (0)_
AT3G12640.1 11Arabidopsis thaliana2E-2259026418 (1)_
AT3G12640.4 11Arabidopsis thaliana6E-1958124420 (0)_
Os04g24170.4 7Oryza sativa1E-2012341660 (0)_
Os04g24170.1 7Oryza sativa2E-2012341660 (0)M
Os04g24170.2 7Oryza sativa2E-2012341660 (0)M
v1_GRMZM2G142597_P02 4a53Zea mays3E-127744723 (3)_
GRMZM2G142597_P02 3.21Zea mays3E-127744720 (0)_
Zm00001eb034750_P001 agpv5Zea mays3E-127744720 (0)_
Show all       

#Spots: The number of publicly accessible spots are in parenthesis

Prediction
PFAM: DUF502(1) Nab2(1) PWI(1) RRM_1(1)
TargetP: Cytoplasm (Class 3 C0.070; M0.252; S0.048; _0.728)
Predotar:
Subcel. Location:
TM-HMM prediction: No
Aramemnon:
TAT position:
Length 537 aa (-cTP 523)
Molecular Weight 60.80 kDA(-cTP )
PI 9.20(-cTP )

Experimental Evidence

 

View GeneModel  

* For details about the exprimental sources click here.

Published Proteomics Data

Comparative Proteomics Data


©Klaas J. van Wijk Lab, Cornell University   Web Accessibility Help